FFCP PHASE1:Hg19::chrX:33229452..33229461,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1756 | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |HGNC=2928 | ||
|TSSclassifier=strong | |||
|UniProt=Q14172 | |UniProt=Q14172 | ||
|association_with_transcript=-23bp_to_ENST00000420596,ENST00000448370_5end | |association_with_transcript=-23bp_to_ENST00000420596,ENST00000448370_5end | ||
|cluster_id=chrX:33229452..33229461,- | |||
|description=CAGE_peak_27_at_DMD_5end | |description=CAGE_peak_27_at_DMD_5end | ||
|id=chrX:33229452..33229461,- | |id=chrX:33229452..33229461,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | |ontology_enrichment_celltype_v019=CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | |ontology_enrichment_disease_v019=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-20!115;UBERON:0006947!2.89e-10!3;UBERON:0004054!2.89e-10!3;UBERON:0001044!4.54e-09!6;UBERON:0003293!4.54e-09!6;UBERON:0003294!4.54e-09!6;UBERON:0010047!4.54e-09!6;UBERON:0000167!4.54e-09!6;UBERON:0001829!8.14e-08!2;UBERON:0005904!8.59e-08!4;UBERON:0004089!1.17e-07!2;UBERON:0003135!5.80e-07!11;UBERON:0003127!6.01e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!1.46e-20!115;UBERON:0006947!2.89e-10!3;UBERON:0004054!2.89e-10!3;UBERON:0001044!4.54e-09!6;UBERON:0003293!4.54e-09!6;UBERON:0003294!4.54e-09!6;UBERON:0010047!4.54e-09!6;UBERON:0000167!4.54e-09!6;UBERON:0001829!8.14e-08!2;UBERON:0005904!8.59e-08!4;UBERON:0004089!1.17e-07!2;UBERON:0003135!5.80e-07!11;UBERON:0003127!6.01e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0001134;1.54e-07;16!UBERON:0002036;1.54e-07;16!UBERON:0001474;7.18e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0001134;1.54e-07;16!UBERON:0002036;1.54e-07;16!UBERON:0001474;7.18e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3 | |||
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| ||
|short_description=p27@DMD | |short_description=p27@DMD | ||
}} | }} |
Latest revision as of 21:58, 24 September 2015
Short description: | p27@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_DMD_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000420596, ENST00000448370_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | Q14172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |