FFCP PHASE1:Hg19::chr1:236046729..236046740,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:236046729..236046740,-
|short_description=p11@LYST
|description=CAGE_peak_11_at_LYST_5end
|association_with_transcript=131bp_to_ENST00000536965_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt=F5H074 | |UniProt=F5H074 | ||
|association_with_transcript=131bp_to_ENST00000536965_5end | |||
|cluster_id=chr1:236046729..236046740,- | |||
|coexpression_cluster_id=C610 | |||
|description=CAGE_peak_11_at_LYST_5end | |||
|id=chr1:236046729..236046740,- | |||
|ontology_enrichment_celltype=CL:0000148!3.10e-13!10;CL:0000541!3.10e-13!10;CL:0000710!1.55e-09!20;CL:0002567!2.63e-09!3;CL:0000453!3.96e-09!5;CL:0000147!4.51e-09!14;CL:0000990!1.87e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.60e-54;10!CL:0000147;1.42e-38;14!CL:0002567;3.85e-34;3!CL:0000710;7.44e-27;20!CL:0000453;2.13e-20;5!CL:0000075;9.46e-20;27!CL:0002077;7.83e-14;34!CL:0002566;1.48e-12;1!CL:0000990;1.31e-11;8!CL:0000451;1.34e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.74e-54,10;CL:0000541,2.74e-54,10;CL:0000147,1.17e-38,14;CL:0002567,3.07e-34,3;CL:0000710,6.50e-27,20;CL:0000453,2.13e-20,5;CL:0000075,8.57e-20,27;CL:0002077,1.35e-15,34;CL:0002566,1.25e-12,1;CL:0000333,3.36e-12,41;CL:0000990,1.31e-11,8;CL:0000451,1.34e-09,10;CL:0000133,2.10e-08,59;CL:0000221,8.34e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.59e-15;3 | |||
|ontology_enrichment_disease=DOID:1909!9.60e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.99e-23;2!DOID:0060060;1.48e-12;1!DOID:0060061;1.48e-12;1!DOID:8691;1.48e-12;1!DOID:6193;3.64e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.99e-23,2;DOID:0060060,1.57e-12,1;DOID:0060061,1.57e-12,1;DOID:8691,1.57e-12,1;DOID:6193,4.31e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.21e-17!57;UBERON:0005068!1.21e-17!57;UBERON:0006241!1.21e-17!57;UBERON:0007135!1.21e-17!57;UBERON:0001869!1.37e-16!32;UBERON:0000955!3.65e-16!69;UBERON:0006238!3.65e-16!69;UBERON:0001893!2.16e-15!34;UBERON:0002616!3.25e-15!59;UBERON:0000956!1.39e-14!25;UBERON:0000203!1.39e-14!25;UBERON:0002619!1.54e-14!22;UBERON:0002791!6.06e-14!33;UBERON:0002780!6.64e-14!41;UBERON:0001890!6.64e-14!41;UBERON:0006240!6.64e-14!41;UBERON:0001017!7.43e-14!82;UBERON:0007023!1.44e-13!115;UBERON:0001950!1.65e-13!20;UBERON:0003080!1.79e-13!42;UBERON:0002020!1.97e-13!34;UBERON:0003528!1.97e-13!34;UBERON:0005743!6.62e-13!86;UBERON:0000073!4.56e-11!94;UBERON:0001016!4.56e-11!94;UBERON:0000153!2.30e-10!129;UBERON:0007811!2.30e-10!129;UBERON:0000033!2.32e-10!123;UBERON:0003075!1.07e-09!86;UBERON:0007284!1.07e-09!86;UBERON:0002346!5.17e-09!90;UBERON:0001872!2.88e-08!5;UBERON:0003056!5.25e-08!61;UBERON:0004121!7.25e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.19e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.13e-08,6;UBERON:0006215,3.13e-08,6 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,3.74637576323797,7.25778008560728,4.68869788840188,1.71072446022705,4.42158218624291,3.30377363628309,5.43070221998099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0.494411622680279,0,0,0,0,0.920418142519393,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,2.65390223834939,1.18219047581419,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0319161948297,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0.449947783103001,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.332787154610557,0.0620964029413835,0,0,6.6725611718325,2.28372266835974,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0,0,2.14346339723327,1.72724292407372,3.10774249086104,0.327609848846413,0,0,3.19979833367888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0.205116364240755,0,0.345786262321089,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.270150338473579,0.781078098613847,0.206686796501184,0.19024743058172,0,0,0,0,0,0,1.00885116665647,0,0,0,0,0.685952037749674,0.271878931907327,0.328863867814245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p11@LYST | |||
}} | }} |
Latest revision as of 13:23, 16 September 2015
Short description: | p11@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LYST_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | 131bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.74e-54 | 10 |
melanoblast | 2.74e-54 | 10 |
pigment cell | 1.17e-38 | 14 |
light melanocyte | 3.07e-34 | 3 |
neurecto-epithelial cell | 6.50e-27 | 20 |
Langerhans cell | 2.13e-20 | 5 |
columnar/cuboidal epithelial cell | 8.57e-20 | 27 |
ecto-epithelial cell | 1.35e-15 | 34 |
dark melanocyte | 1.25e-12 | 1 |
migratory neural crest cell | 3.36e-12 | 41 |
conventional dendritic cell | 1.31e-11 | 8 |
dendritic cell | 1.34e-09 | 10 |
neurectodermal cell | 2.10e-08 | 59 |
ectodermal cell | 8.34e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.13e-08 | 6 |
rhombic lip | 3.13e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.99e-23 | 2 |
non-Hodgkin lymphoma | 1.57e-12 | 1 |
cutaneous T cell lymphoma | 1.57e-12 | 1 |
mycosis fungoides | 1.57e-12 | 1 |
epithelioid sarcoma | 4.31e-12 | 1 |