FFCP PHASE1:Hg19::chr2:231084723..231084734,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3431 | |EntrezGene=3431 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5401 | |HGNC=5401 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000462232_5end | |association_with_transcript=-19bp_to_ENST00000462232_5end | ||
|cluster_id=chr2:231084723..231084734,- | |||
|description=CAGE_peak_4_at_SP110_5end | |description=CAGE_peak_4_at_SP110_5end | ||
|id=chr2:231084723..231084734,- | |id=chr2:231084723..231084734,- | ||
|ontology_enrichment_celltype=CL:0000542!1.09e-19!53;CL:0000051!1.09e-19!53;CL:0000838!3.53e-19!52;CL:0000738!9.96e-14!140;CL:0002087!9.34e-13!119;CL:0002031!2.46e-12!124;CL:0000084!7.88e-11!25;CL:0000827!7.88e-11!25;CL:0000037!4.15e-10!172;CL:0000566!4.15e-10!172;CL:0000791!1.79e-09!18;CL:0000789!1.79e-09!18;CL:0002420!1.79e-09!18;CL:0002419!1.79e-09!18;CL:0000790!1.79e-09!18;CL:0000988!1.96e-09!182;CL:0002032!1.57e-08!165;CL:0000837!1.57e-08!165;CL:0000945!1.89e-08!24;CL:0000826!1.89e-08!24 | |ontology_enrichment_celltype=CL:0000542!1.09e-19!53;CL:0000051!1.09e-19!53;CL:0000838!3.53e-19!52;CL:0000738!9.96e-14!140;CL:0002087!9.34e-13!119;CL:0002031!2.46e-12!124;CL:0000084!7.88e-11!25;CL:0000827!7.88e-11!25;CL:0000037!4.15e-10!172;CL:0000566!4.15e-10!172;CL:0000791!1.79e-09!18;CL:0000789!1.79e-09!18;CL:0002420!1.79e-09!18;CL:0002419!1.79e-09!18;CL:0000790!1.79e-09!18;CL:0000988!1.96e-09!182;CL:0002032!1.57e-08!165;CL:0000837!1.57e-08!165;CL:0000945!1.89e-08!24;CL:0000826!1.89e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.54e-13;25!CL:0000542;4.02e-13;53!CL:0000791;8.37e-12;18!CL:0000789;8.37e-12;18!CL:0002419;8.37e-12;18!CL:0000945;2.37e-08;24!CL:0000625;1.44e-07;11 | |ontology_enrichment_celltype_v019=CL:0000084;1.54e-13;25!CL:0000542;4.02e-13;53!CL:0000791;8.37e-12;18!CL:0000789;8.37e-12;18!CL:0002419;8.37e-12;18!CL:0000945;2.37e-08;24!CL:0000625;1.44e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.18e-23,53;CL:0000051,1.18e-23,53;CL:0000838,6.37e-23,52;CL:0000738,4.31e-17,136;CL:0002087,2.86e-16,115;CL:0002031,2.42e-15,120;CL:0000084,1.17e-13,25;CL:0000827,1.17e-13,25;CL:0000791,1.73e-12,18;CL:0000789,1.73e-12,18;CL:0002420,1.73e-12,18;CL:0002419,1.73e-12,18;CL:0000790,1.73e-12,18;CL:0000037,7.88e-12,168;CL:0000988,5.36e-11,177;CL:0002032,2.80e-10,161;CL:0000837,2.80e-10,161;CL:0000945,6.35e-09,24;CL:0000826,6.35e-09,24;CL:0000625,3.77e-08,11;CL:0000236,3.30e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;4.02e-13;53!CL:0000790;8.37e-12;18 | |ontology_enrichment_development_v019=CL:0000051;4.02e-13;53!CL:0000790;8.37e-12;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@SP110 | |short_description=p4@SP110 | ||
}} | }} |
Latest revision as of 06:17, 25 September 2015
Short description: | p4@SP110 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SP110_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000462232_5end |
EntrezGene: | SP110 |
HGNC: | 5401 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.18e-23 | 53 |
common lymphoid progenitor | 1.18e-23 | 53 |
lymphoid lineage restricted progenitor cell | 6.37e-23 | 52 |
leukocyte | 4.31e-17 | 136 |
nongranular leukocyte | 2.86e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 2.42e-15 | 120 |
T cell | 1.17e-13 | 25 |
pro-T cell | 1.17e-13 | 25 |
mature alpha-beta T cell | 1.73e-12 | 18 |
alpha-beta T cell | 1.73e-12 | 18 |
immature T cell | 1.73e-12 | 18 |
mature T cell | 1.73e-12 | 18 |
immature alpha-beta T cell | 1.73e-12 | 18 |
hematopoietic stem cell | 7.88e-12 | 168 |
hematopoietic cell | 5.36e-11 | 177 |
hematopoietic oligopotent progenitor cell | 2.80e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.80e-10 | 161 |
lymphocyte of B lineage | 6.35e-09 | 24 |
pro-B cell | 6.35e-09 | 24 |
CD8-positive, alpha-beta T cell | 3.77e-08 | 11 |
B cell | 3.30e-07 | 14 |