FFCP PHASE1:Hg19::chr20:43850711..43850740,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:43850711..43850740,+ | |||
|coexpression_cluster_id=C43 | |coexpression_cluster_id=C43 | ||
|description=CAGE_peak_at_chr20:43850711..43850740,+ | |description=CAGE_peak_at_chr20:43850711..43850740,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.23e-66;1!UBERON:0007297;3.61e-34;2!UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10 | |ontology_enrichment_development_v019=UBERON:0005754;1.23e-66;1!UBERON:0007297;3.61e-34;2!UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.24e-88,3;UBERON:0004054,6.24e-88,3;UBERON:0000998,1.23e-66,1;UBERON:0006868,1.23e-66,1;UBERON:0001000,2.39e-66,1;UBERON:0005352,2.39e-66,1;UBERON:0005904,2.40e-66,4;UBERON:0001255,7.05e-34,2;UBERON:0001556,7.05e-34,2;UBERON:0003135,4.86e-25,11;UBERON:0000058,4.91e-15,19;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0004175,1.03e-11,25;UBERON:0003064,1.47e-10,28;UBERON:0000489,1.20e-09,31;UBERON:0000473,1.24e-09,8;UBERON:0000080,1.04e-08,9;UBERON:0002120,1.04e-08,9;UBERON:0004875,1.04e-08,9;UBERON:0005721,1.04e-08,9;UBERON:0005754,1.04e-08,9;UBERON:0007297,1.04e-08,9;UBERON:0004876,2.32e-07,11;UBERON:0003937,7.48e-07,12;UBERON:0005399,7.48e-07,12;UBERON:0003887,7.48e-07,12;UBERON:0002323,7.52e-07,46;UBERON:0006554,1.00e-06,47 | |||
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|short_description=p@chr20:43850711..43850740,+ | |short_description=p@chr20:43850711..43850740,+ | ||
}} | }} |
Latest revision as of 14:22, 28 July 2015
Short description: | p@chr20:43850711..43850740, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:43850711..43850740, + |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.24e-88 | 3 |
internal male genitalia | 6.24e-88 | 3 |
seminal vesicle | 1.23e-66 | 1 |
seminal fluid secreting gland | 1.23e-66 | 1 |
vas deferens | 2.39e-66 | 1 |
spermatic cord | 2.39e-66 | 1 |
duct of male reproductive system | 2.40e-66 | 4 |
urinary bladder | 7.05e-34 | 2 |
lower urinary tract | 7.05e-34 | 2 |
male reproductive organ | 4.86e-25 | 11 |
duct | 4.91e-15 | 19 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
internal genitalia | 1.03e-11 | 25 |
intermediate mesoderm | 1.47e-10 | 28 |
cavitated compound organ | 1.20e-09 | 31 |
testis | 1.24e-09 | 8 |
mesonephros | 1.04e-08 | 9 |
pronephros | 1.04e-08 | 9 |
nephrogenic cord | 1.04e-08 | 9 |
pronephric mesoderm | 1.04e-08 | 9 |
rostral part of nephrogenic cord | 1.04e-08 | 9 |
presumptive pronephric mesoderm | 1.04e-08 | 9 |
urogenital ridge | 2.32e-07 | 11 |
sex gland | 7.48e-07 | 12 |
male reproductive gland | 7.48e-07 | 12 |
intraembryonic coelom | 7.48e-07 | 12 |
body cavity | 7.52e-07 | 46 |
urinary system structure | 1.00e-06 | 47 |