FFCP PHASE1:Hg19::chr12:47488205..47488211,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:47488205..47488211,+ | |||
|description=CAGE_peak_at_chr12:47488205..47488211,+ | |description=CAGE_peak_at_chr12:47488205..47488211,+ | ||
|id=chr12:47488205..47488211,+ | |id=chr12:47488205..47488211,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.81e-07!18;CL:0000789!4.81e-07!18;CL:0002420!4.81e-07!18;CL:0002419!4.81e-07!18;CL:0000790!4.81e-07!18 | |ontology_enrichment_celltype=CL:0000791!4.81e-07!18;CL:0000789!4.81e-07!18;CL:0002420!4.81e-07!18;CL:0002419!4.81e-07!18;CL:0000790!4.81e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.33e-15;11!CL:0000746;1.31e-14;3!CL:0000737;2.66e-11;4!CL:0000791;8.47e-10;18!CL:0000789;8.47e-10;18!CL:0002419;8.47e-10;18!CL:0000084;2.50e-07;25 | |ontology_enrichment_celltype_v019=CL:0000625;2.33e-15;11!CL:0000746;1.31e-14;3!CL:0000737;2.66e-11;4!CL:0000791;8.47e-10;18!CL:0000789;8.47e-10;18!CL:0002419;8.47e-10;18!CL:0000084;2.50e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.33e-15,11;CL:0000746,1.22e-14,3;CL:0000513,1.22e-14,3;CL:0000737,2.53e-11,4;CL:0000791,8.47e-10,18;CL:0000789,8.47e-10,18;CL:0002420,8.47e-10,18;CL:0002419,8.47e-10,18;CL:0000790,8.47e-10,18;CL:0000084,2.50e-07,25;CL:0000827,2.50e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000513;1.31e-14;3!CL:0000790;8.47e-10;18 | |ontology_enrichment_development_v019=CL:0000513;1.31e-14;3!CL:0000790;8.47e-10;18 | ||
|ontology_enrichment_disease=DOID:193!3.89e-09!29;DOID:120!1.21e-08!27;DOID:2394!2.22e-07!14 | |ontology_enrichment_disease=DOID:193!3.89e-09!29;DOID:120!1.21e-08!27;DOID:2394!2.22e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:47488205..47488211,+ | |short_description=p@chr12:47488205..47488211,+ | ||
}} | }} |
Latest revision as of 08:45, 24 July 2015
Short description: | p@chr12:47488205..47488211, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:47488205..47488211, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.33e-15 | 11 |
cardiac muscle cell | 1.22e-14 | 3 |
cardiac muscle myoblast | 1.22e-14 | 3 |
striated muscle cell | 2.53e-11 | 4 |
mature alpha-beta T cell | 8.47e-10 | 18 |
alpha-beta T cell | 8.47e-10 | 18 |
immature T cell | 8.47e-10 | 18 |
mature T cell | 8.47e-10 | 18 |
immature alpha-beta T cell | 8.47e-10 | 18 |
T cell | 2.50e-07 | 25 |
pro-T cell | 2.50e-07 | 25 |