FFCP PHASE1:Hg19::chr2:74648848..74648894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84058 | |EntrezGene=84058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25770 | |HGNC=25770 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H977,B9A049,C9J016 | |UniProt=Q9H977,B9A049,C9J016 | ||
|association_with_transcript=0bp_to_ENST00000348227,ENST00000409791,ENST00000426787,ENST00000465134,ENST00000468778,ENST00000469932,ENST00000475328,ENST00000480089,ENST00000482880,ENST00000493982,NM_032118,uc002slb.2_5end | |association_with_transcript=0bp_to_ENST00000348227,ENST00000409791,ENST00000426787,ENST00000465134,ENST00000468778,ENST00000469932,ENST00000475328,ENST00000480089,ENST00000482880,ENST00000493982,NM_032118,uc002slb.2_5end | ||
|cluster_id=chr2:74648848..74648894,+ | |||
|description=CAGE_peak_1_at_WDR54_5end | |description=CAGE_peak_1_at_WDR54_5end | ||
|id=chr2:74648848..74648894,+ | |id=chr2:74648848..74648894,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.52e-12!248;CL:0000220!4.71e-12!246;CL:0000055!2.31e-11!180;CL:0000183!1.31e-09!59;CL:0000393!5.56e-09!60;CL:0000211!5.56e-09!60;CL:0000003!1.32e-08!722;CL:0000066!1.33e-08!254;CL:0000222!2.70e-08!119;CL:0000012!3.03e-08!682;CL:0000187!5.56e-08!54;CL:0000333!5.97e-08!41;CL:0000221!6.35e-08!71;CL:0000359!7.15e-08!32;CL:0000548!7.77e-08!679;CL:0000004!7.77e-08!679;CL:0000255!7.77e-08!679;CL:0000192!9.83e-08!42;CL:0000514!9.83e-08!42;CL:0000133!1.05e-07!59;CL:0000680!1.63e-07!57;CL:0000056!1.63e-07!57;CL:0000355!1.63e-07!57 | |ontology_enrichment_celltype=CL:0002321!1.52e-12!248;CL:0000220!4.71e-12!246;CL:0000055!2.31e-11!180;CL:0000183!1.31e-09!59;CL:0000393!5.56e-09!60;CL:0000211!5.56e-09!60;CL:0000003!1.32e-08!722;CL:0000066!1.33e-08!254;CL:0000222!2.70e-08!119;CL:0000012!3.03e-08!682;CL:0000187!5.56e-08!54;CL:0000333!5.97e-08!41;CL:0000221!6.35e-08!71;CL:0000359!7.15e-08!32;CL:0000548!7.77e-08!679;CL:0000004!7.77e-08!679;CL:0000255!7.77e-08!679;CL:0000192!9.83e-08!42;CL:0000514!9.83e-08!42;CL:0000133!1.05e-07!59;CL:0000680!1.63e-07!57;CL:0000056!1.63e-07!57;CL:0000355!1.63e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.37e-07;32!CL:1000497;6.25e-07;17!CL:0002518;6.25e-07;17 | |ontology_enrichment_celltype_v019=CL:0000359;1.37e-07;32!CL:1000497;6.25e-07;17!CL:0002518;6.25e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.16e-12,250;CL:0000066,1.02e-08,253;CL:0000393,1.03e-08,61;CL:0000211,1.03e-08,61;CL:0000222,2.27e-08,121;CL:0000221,5.72e-08,72;CL:0000333,5.96e-08,41;CL:0000359,7.15e-08,32;CL:0000187,1.02e-07,55;CL:0000133,1.05e-07,59;CL:0000192,1.98e-07,43;CL:0000514,1.98e-07,43;CL:0000680,2.84e-07,58;CL:0000056,2.84e-07,58;CL:0000355,2.84e-07,58;CL:1000497,5.55e-07,17;CL:0002518,5.55e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.80e-08!82;UBERON:0001637!2.57e-08!42;UBERON:0003509!2.57e-08!42;UBERON:0004572!2.57e-08!42;UBERON:0004290!8.86e-08!70;UBERON:0002049!1.08e-07!79;UBERON:0007798!1.08e-07!79;UBERON:0000055!1.19e-07!69;UBERON:0001981!2.94e-07!60;UBERON:0007500!2.94e-07!60;UBERON:0004537!2.94e-07!60;UBERON:0006965!2.94e-07!60;UBERON:0000119!4.03e-07!312;UBERON:0000914!5.18e-07!83;UBERON:0002329!5.18e-07!83;UBERON:0003077!5.18e-07!83;UBERON:0003059!5.18e-07!83;UBERON:0007282!5.18e-07!83;UBERON:0009618!5.18e-07!83;UBERON:0007285!5.18e-07!83;UBERON:0000483!6.90e-07!309 | |ontology_enrichment_uberon=UBERON:0000486!1.80e-08!82;UBERON:0001637!2.57e-08!42;UBERON:0003509!2.57e-08!42;UBERON:0004572!2.57e-08!42;UBERON:0004290!8.86e-08!70;UBERON:0002049!1.08e-07!79;UBERON:0007798!1.08e-07!79;UBERON:0000055!1.19e-07!69;UBERON:0001981!2.94e-07!60;UBERON:0007500!2.94e-07!60;UBERON:0004537!2.94e-07!60;UBERON:0006965!2.94e-07!60;UBERON:0000119!4.03e-07!312;UBERON:0000914!5.18e-07!83;UBERON:0002329!5.18e-07!83;UBERON:0003077!5.18e-07!83;UBERON:0003059!5.18e-07!83;UBERON:0007282!5.18e-07!83;UBERON:0009618!5.18e-07!83;UBERON:0007285!5.18e-07!83;UBERON:0000483!6.90e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;4.08e-07;74 | |ontology_enrichment_uberon_v019=UBERON:0003914;4.08e-07;74 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.93e-09,78;UBERON:0001637,2.57e-08,42;UBERON:0003509,2.57e-08,42;UBERON:0004572,2.57e-08,42;UBERON:0000486,2.81e-08,83;UBERON:0002049,8.34e-08,78;UBERON:0007798,8.34e-08,78;UBERON:0000055,8.88e-08,68;UBERON:0002329,1.41e-07,71;UBERON:0003059,1.41e-07,71;UBERON:0007282,1.41e-07,71;UBERON:0004290,1.41e-07,71;UBERON:0009618,1.41e-07,71;UBERON:0003077,1.56e-07,72;UBERON:0007285,1.56e-07,72;UBERON:0007524,1.78e-07,73;UBERON:0007500,2.16e-07,59;UBERON:0001981,2.16e-07,59;UBERON:0004537,2.16e-07,59;UBERON:0006965,2.16e-07,59;UBERON:0000119,2.54e-07,309;UBERON:0000483,4.38e-07,306 | |||
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| ||
|short_description=p1@WDR54 | |short_description=p1@WDR54 | ||
}} | }} |
Latest revision as of 10:57, 18 September 2015
Short description: | p1@WDR54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WDR54_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000348227, ENST00000409791, ENST00000426787, ENST00000465134, ENST00000468778, ENST00000469932, ENST00000475328, ENST00000480089, ENST00000482880, ENST00000493982, NM_032118, uc002slb.2_5end |
EntrezGene: | WDR54 |
HGNC: | 25770 |
UniProt: | Q9H977B9A049C9J016 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.16e-12 | 250 |
epithelial cell | 1.02e-08 | 253 |
electrically responsive cell | 1.03e-08 | 61 |
electrically active cell | 1.03e-08 | 61 |
mesodermal cell | 2.27e-08 | 121 |
ectodermal cell | 5.72e-08 | 72 |
migratory neural crest cell | 5.96e-08 | 41 |
vascular associated smooth muscle cell | 7.15e-08 | 32 |
muscle cell | 1.02e-07 | 55 |
neurectodermal cell | 1.05e-07 | 59 |
smooth muscle cell | 1.98e-07 | 43 |
smooth muscle myoblast | 1.98e-07 | 43 |
muscle precursor cell | 2.84e-07 | 58 |
myoblast | 2.84e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.84e-07 | 58 |
kidney cell | 5.55e-07 | 17 |
kidney epithelial cell | 5.55e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.93e-09 | 78 |
artery | 2.57e-08 | 42 |
arterial blood vessel | 2.57e-08 | 42 |
arterial system | 2.57e-08 | 42 |
multilaminar epithelium | 2.81e-08 | 83 |
vasculature | 8.34e-08 | 78 |
vascular system | 8.34e-08 | 78 |
vessel | 8.88e-08 | 68 |
somite | 1.41e-07 | 71 |
presomitic mesoderm | 1.41e-07 | 71 |
presumptive segmental plate | 1.41e-07 | 71 |
dermomyotome | 1.41e-07 | 71 |
trunk paraxial mesoderm | 1.41e-07 | 71 |
paraxial mesoderm | 1.56e-07 | 72 |
presumptive paraxial mesoderm | 1.56e-07 | 72 |
dense mesenchyme tissue | 1.78e-07 | 73 |
epithelial tube open at both ends | 2.16e-07 | 59 |
blood vessel | 2.16e-07 | 59 |
blood vasculature | 2.16e-07 | 59 |
vascular cord | 2.16e-07 | 59 |
cell layer | 2.54e-07 | 309 |
epithelium | 4.38e-07 | 306 |