FFCP PHASE1:Hg19::chr3:77089214..77089314,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6092 | |EntrezGene=6092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |HGNC=10250 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCK4 | |UniProt=Q9HCK4 | ||
|association_with_transcript=0bp_to_NM_002942,uc003dpy.3,uc003dpz.2,uc011bgj.1,uc011bgk.1_5end | |association_with_transcript=0bp_to_NM_002942,uc003dpy.3,uc003dpz.2,uc011bgj.1,uc011bgk.1_5end | ||
|cluster_id=chr3:77089214..77089314,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_1_at_ROBO2_5end | |description=CAGE_peak_1_at_ROBO2_5end | ||
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|ontology_enrichment_celltype=CL:0000133!2.51e-08!59;CL:0000221!4.91e-07!71 | |ontology_enrichment_celltype=CL:0000133!2.51e-08!59;CL:0000221!4.91e-07!71 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.20e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.84e-10;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.84e-10;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;3.85e-24;32!UBERON:0002791;4.55e-24;32!UBERON:0003528;7.14e-24;34!UBERON:0002020;7.14e-24;34!UBERON:0001893;8.44e-24;34!UBERON:0002780;3.13e-22;41!UBERON:0001890;3.13e-22;41!UBERON:0002619;2.48e-20;22!UBERON:0000956;3.26e-20;25!UBERON:0000203;3.26e-20;25!UBERON:0000073;7.06e-20;53!UBERON:0002616;7.06e-20;53!UBERON:0001950;9.59e-19;20!UBERON:0000922;1.04e-15;49!UBERON:0000955;7.47e-15;68!UBERON:0001017;9.89e-15;75!UBERON:0001016;5.91e-14;83!UBERON:0002420;2.75e-09;9!UBERON:0007245;2.75e-09;9!UBERON:0010009;2.75e-09;9!UBERON:0010011;2.75e-09;9!UBERON:0000454;2.75e-09;9!UBERON:0000125;7.46e-09;9!UBERON:0002308;7.46e-09;9!UBERON:0011216;7.48e-08;132!UBERON:0009663;1.00e-07;7!UBERON:0001871;1.38e-07;6!UBERON:0007023;3.23e-07;114!UBERON:0002050;4.43e-07;5!UBERON:0005423;4.43e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001869;3.85e-24;32!UBERON:0002791;4.55e-24;32!UBERON:0003528;7.14e-24;34!UBERON:0002020;7.14e-24;34!UBERON:0001893;8.44e-24;34!UBERON:0002780;3.13e-22;41!UBERON:0001890;3.13e-22;41!UBERON:0002619;2.48e-20;22!UBERON:0000956;3.26e-20;25!UBERON:0000203;3.26e-20;25!UBERON:0000073;7.06e-20;53!UBERON:0002616;7.06e-20;53!UBERON:0001950;9.59e-19;20!UBERON:0000922;1.04e-15;49!UBERON:0000955;7.47e-15;68!UBERON:0001017;9.89e-15;75!UBERON:0001016;5.91e-14;83!UBERON:0002420;2.75e-09;9!UBERON:0007245;2.75e-09;9!UBERON:0010009;2.75e-09;9!UBERON:0010011;2.75e-09;9!UBERON:0000454;2.75e-09;9!UBERON:0000125;7.46e-09;9!UBERON:0002308;7.46e-09;9!UBERON:0011216;7.48e-08;132!UBERON:0009663;1.00e-07;7!UBERON:0001871;1.38e-07;6!UBERON:0007023;3.23e-07;114!UBERON:0002050;4.43e-07;5!UBERON:0005423;4.43e-07;5 | ||
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| ||
|short_description=p1@ROBO2 | |short_description=p1@ROBO2 | ||
}} | }} |
Latest revision as of 16:11, 19 September 2015
Short description: | p1@ROBO2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ROBO2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_NM_002942, uc003dpy.3, uc003dpz.2, uc011bgj.1, uc011bgk.1_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | Q9HCK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.20e-07 | 8 |