FFCP PHASE1:Hg19::chr15:56365697..56365717,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:56365697..56365717,+ | |||
|coexpression_cluster_id=C2339 | |coexpression_cluster_id=C2339 | ||
|description=CAGE_peak_at_chr15:56365697..56365717,+ | |description=CAGE_peak_at_chr15:56365697..56365717,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.67e-17!5;CL:1000415!1.17e-07!2;CL:0000159!2.37e-07!2;CL:0002535!4.19e-07!2 | |ontology_enrichment_celltype=CL:0002322!1.67e-17!5;CL:1000415!1.17e-07!2;CL:0000159!2.37e-07!2;CL:0002535!4.19e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.58e-52;5!CL:0002321;1.98e-17;15!CL:0000148;5.03e-10;10!CL:0000540;3.51e-08;6!CL:0000404;3.51e-08;6!CL:0000147;2.65e-07;14!CL:1000415;8.93e-07;2 | |ontology_enrichment_celltype_v019=CL:0002322;3.58e-52;5!CL:0002321;1.98e-17;15!CL:0000148;5.03e-10;10!CL:0000540;3.51e-08;6!CL:0000404;3.51e-08;6!CL:0000147;2.65e-07;14!CL:1000415;8.93e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.90e-52,5;CL:0000148,4.81e-10,10;CL:0000541,4.81e-10,10;CL:0000540,3.51e-08,6;CL:0000031,3.51e-08,6;CL:0000404,3.51e-08,6;CL:0000147,2.57e-07,14;CL:1000415,8.93e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;3.51e-08;6 | |ontology_enrichment_development_v019=CL:0000031;3.51e-08;6 | ||
|ontology_enrichment_disease=DOID:4362!3.99e-10!5;DOID:299!7.71e-09!25;DOID:120!7.79e-08!27;DOID:5093!8.98e-08!4;DOID:1612!8.98e-08!4;DOID:4468!1.96e-07!2;DOID:193!3.50e-07!29;DOID:305!6.13e-07!106 | |ontology_enrichment_disease=DOID:4362!3.99e-10!5;DOID:299!7.71e-09!25;DOID:120!7.79e-08!27;DOID:5093!8.98e-08!4;DOID:1612!8.98e-08!4;DOID:4468!1.96e-07!2;DOID:193!3.50e-07!29;DOID:305!6.13e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3151;5.04e-12;1!DOID:3149;5.04e-12;1 | |ontology_enrichment_disease_v019=DOID:3151;5.04e-12;1!DOID:3149;5.04e-12;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,4.53e-12,1;DOID:3149,4.53e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0006331!3.60e-09!3;UBERON:0000002!1.92e-08!6;UBERON:0001560!1.92e-08!6;UBERON:0002308!7.79e-08!9;UBERON:0000125!7.79e-08!9;UBERON:0000310!1.01e-07!10;UBERON:0002950!4.19e-07!2;UBERON:0006955!4.19e-07!2;UBERON:0004801!4.19e-07!2;UBERON:0001891!4.19e-07!2;UBERON:0009616!4.19e-07!2;UBERON:0001443!5.49e-07!11;UBERON:0003100!6.83e-07!41 | |ontology_enrichment_uberon=UBERON:0006331!3.60e-09!3;UBERON:0000002!1.92e-08!6;UBERON:0001560!1.92e-08!6;UBERON:0002308!7.79e-08!9;UBERON:0000125!7.79e-08!9;UBERON:0000310!1.01e-07!10;UBERON:0002950!4.19e-07!2;UBERON:0006955!4.19e-07!2;UBERON:0004801!4.19e-07!2;UBERON:0001891!4.19e-07!2;UBERON:0009616!4.19e-07!2;UBERON:0001443!5.49e-07!11;UBERON:0003100!6.83e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.82e-12;49 | |ontology_enrichment_uberon_v019=UBERON:0000922;1.82e-12;49 | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr15:56365697..56365717,+ | |short_description=p@chr15:56365697..56365717,+ | ||
}} | }} |
Latest revision as of 02:43, 25 July 2015
Short description: | p@chr15:56365697..56365717, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:56365697..56365717, + |
Coexpression cluster: | C2339_iPS_gall_H9_keratoacanthoma_HES3GFP_colon_kidney |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.90e-52 | 5 |
melanocyte | 4.81e-10 | 10 |
melanoblast | 4.81e-10 | 10 |
neuron | 3.51e-08 | 6 |
neuroblast | 3.51e-08 | 6 |
electrically signaling cell | 3.51e-08 | 6 |
pigment cell | 2.57e-07 | 14 |
epithelial cell of gall bladder | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.53e-12 | 1 |
keratoacanthoma | 4.53e-12 | 1 |