FFCP PHASE1:Hg19::chr1:25255329..25255339,-: Difference between revisions
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|id=chr1:25255329..25255339,-
|short_description=p21@RUNX3
|description=CAGE_peak_21_at_RUNX3_5end
|association_with_transcript=-40bp_to_ENST00000496967_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=864 | |EntrezGene=864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |HGNC=10473 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENST00000496967_5end | |||
|cluster_id=chr1:25255329..25255339,- | |||
|coexpression_cluster_id=C2101 | |||
|description=CAGE_peak_21_at_RUNX3_5end | |||
|id=chr1:25255329..25255339,- | |||
|ontology_enrichment_celltype=CL:0000738!8.27e-37!140;CL:0000988!5.32e-30!182;CL:0000037!1.82e-28!172;CL:0000566!1.82e-28!172;CL:0002032!3.70e-28!165;CL:0000837!3.70e-28!165;CL:0002031!1.24e-24!124;CL:0002087!3.61e-22!119;CL:0000838!1.15e-20!52;CL:0000945!2.72e-20!24;CL:0000826!2.72e-20!24;CL:0000542!3.35e-20!53;CL:0000051!3.35e-20!53;CL:0000767!7.29e-14!3;CL:0000766!2.48e-12!76;CL:0000763!1.42e-10!112;CL:0000049!1.42e-10!112;CL:0000081!5.15e-10!11;CL:0000134!2.07e-09!358;CL:0000094!4.42e-09!8;CL:0002320!4.51e-09!365;CL:0002057!1.72e-08!42;CL:0000453!3.45e-08!5;CL:0002274!3.63e-08!5;CL:0000457!3.63e-08!5;CL:0002191!3.63e-08!5;CL:0000097!3.63e-08!5;CL:0000831!3.63e-08!5;CL:0002028!3.63e-08!5;CL:0000219!6.98e-08!390;CL:0000860!8.39e-08!45;CL:0000839!1.66e-07!70;CL:0000557!2.30e-07!71;CL:0000080!5.22e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.06e-19;24!CL:0000542;9.95e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.88e-19,24;CL:0000826,1.88e-19,24;CL:0000838,4.67e-16,52;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;9.95e-10;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.77e-11!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.73e-09!102;UBERON:0003061!2.73e-09!102;UBERON:0002193!3.30e-09!112;UBERON:0002384!1.30e-08!375;UBERON:0002371!2.31e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p21@RUNX3 | |||
}} | }} |
Latest revision as of 02:35, 17 September 2015
Short description: | p21@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_RUNX3_5end |
Coexpression cluster: | C2101_adult_B_xeroderma_lymphoma_signet_appendix_tonsil |
Association with transcript: | -40bp_to_ENST00000496967_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.88e-19 | 24 |
pro-B cell | 1.88e-19 | 24 |
lymphoid lineage restricted progenitor cell | 4.67e-16 | 52 |
lymphocyte | 9.01e-16 | 53 |
common lymphoid progenitor | 9.01e-16 | 53 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |