FFCP PHASE1:Hg19::chr3:89156891..89156894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2042 | |EntrezGene=2042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3387 | |HGNC=3387 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXA2 | |UniProt=C9JXA2 | ||
|association_with_transcript=65bp_to_ENST00000494014_5end | |association_with_transcript=65bp_to_ENST00000494014_5end | ||
|cluster_id=chr3:89156891..89156894,+ | |||
|coexpression_cluster_id=C214 | |coexpression_cluster_id=C214 | ||
|description=CAGE_peak_5_at_EPHA3_5end | |description=CAGE_peak_5_at_EPHA3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.34e-37;6!CL:0000404;1.34e-37;6!CL:0002319;3.55e-15;25!CL:0000047;6.43e-14;2 | |ontology_enrichment_celltype_v019=CL:0000540;1.34e-37;6!CL:0000404;1.34e-37;6!CL:0002319;3.55e-15;25!CL:0000047;6.43e-14;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.25e-50,8;CL:0000540,9.19e-38,6;CL:0000031,9.19e-38,6;CL:0000404,9.19e-38,6;CL:0002319,3.18e-15,25;CL:0000133,5.78e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.34e-37;6 | |ontology_enrichment_development_v019=CL:0000031;1.34e-37;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;1.80e-07;4 | |ontology_enrichment_disease_v019=DOID:5409;1.80e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.68e-10!115 | |ontology_enrichment_uberon=UBERON:0007023!8.68e-10!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.64e-11,81;UBERON:0001016,7.63e-10,89 | |||
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| ||
|short_description=p5@EPHA3 | |short_description=p5@EPHA3 | ||
}} | }} |
Latest revision as of 19:24, 19 September 2015
Short description: | p5@EPHA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EPHA3_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 65bp_to_ENST00000494014_5end |
EntrezGene: | EPHA3 |
HGNC: | 3387 |
UniProt: | C9JXA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.25e-50 | 8 |
neuron | 9.19e-38 | 6 |
neuroblast | 9.19e-38 | 6 |
electrically signaling cell | 9.19e-38 | 6 |
neural cell | 3.18e-15 | 25 |
neurectodermal cell | 5.78e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.64e-11 | 81 |
nervous system | 7.63e-10 | 89 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.04e-07 | 4 |