FFCP PHASE1:Hg19::chr2:149052089..149052093,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:149052089..149052093,+ | |||
|description=CAGE_peak_at_chr2:149052089..149052093,+ | |description=CAGE_peak_at_chr2:149052089..149052093,+ | ||
|id=chr2:149052089..149052093,+ | |id=chr2:149052089..149052093,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002504;5.47e-07;3!CL:1000279;5.47e-07;3!CL:1000280;5.47e-07;3 | |ontology_enrichment_celltype_v019=CL:0002504;5.47e-07;3!CL:1000279;5.47e-07;3!CL:1000280;5.47e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002504,8.30e-07,3;CL:1000279,8.30e-07,3;CL:1000280,8.30e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.44e-19!115;UBERON:0001049!5.38e-15!57;UBERON:0005068!5.38e-15!57;UBERON:0006241!5.38e-15!57;UBERON:0007135!5.38e-15!57;UBERON:0002616!2.00e-13!59;UBERON:0002780!3.26e-13!41;UBERON:0001890!3.26e-13!41;UBERON:0006240!3.26e-13!41;UBERON:0000955!7.17e-13!69;UBERON:0006238!7.17e-13!69;UBERON:0003080!1.36e-12!42;UBERON:0001017!1.86e-11!82;UBERON:0000073!3.16e-11!94;UBERON:0001016!3.16e-11!94;UBERON:0003075!9.86e-11!86;UBERON:0007284!9.86e-11!86;UBERON:0005743!1.25e-10!86;UBERON:0002020!1.47e-10!34;UBERON:0003528!1.47e-10!34;UBERON:0002346!2.93e-10!90;UBERON:0001893!4.09e-10!34;UBERON:0002791!8.92e-10!33;UBERON:0003056!3.45e-09!61;UBERON:0001869!3.79e-09!32;UBERON:0000153!7.69e-09!129;UBERON:0007811!7.69e-09!129;UBERON:0000033!2.88e-07!123;UBERON:0002619!3.03e-07!22;UBERON:0000956!3.21e-07!25;UBERON:0000203!3.21e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!7.44e-19!115;UBERON:0001049!5.38e-15!57;UBERON:0005068!5.38e-15!57;UBERON:0006241!5.38e-15!57;UBERON:0007135!5.38e-15!57;UBERON:0002616!2.00e-13!59;UBERON:0002780!3.26e-13!41;UBERON:0001890!3.26e-13!41;UBERON:0006240!3.26e-13!41;UBERON:0000955!7.17e-13!69;UBERON:0006238!7.17e-13!69;UBERON:0003080!1.36e-12!42;UBERON:0001017!1.86e-11!82;UBERON:0000073!3.16e-11!94;UBERON:0001016!3.16e-11!94;UBERON:0003075!9.86e-11!86;UBERON:0007284!9.86e-11!86;UBERON:0005743!1.25e-10!86;UBERON:0002020!1.47e-10!34;UBERON:0003528!1.47e-10!34;UBERON:0002346!2.93e-10!90;UBERON:0001893!4.09e-10!34;UBERON:0002791!8.92e-10!33;UBERON:0003056!3.45e-09!61;UBERON:0001869!3.79e-09!32;UBERON:0000153!7.69e-09!129;UBERON:0007811!7.69e-09!129;UBERON:0000033!2.88e-07!123;UBERON:0002619!3.03e-07!22;UBERON:0000956!3.21e-07!25;UBERON:0000203!3.21e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.16e-10;4!UBERON:0010133;1.16e-10;4!UBERON:0002784;1.16e-10;4!UBERON:0001894;2.41e-10;7!UBERON:0001905;4.36e-10;2!UBERON:0002702;4.36e-10;2!UBERON:0002757;4.36e-10;2!UBERON:0010134;4.36e-10;2!UBERON:0005408;4.36e-10;2!UBERON:0001899;4.36e-10;2!UBERON:0001870;5.47e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003296;1.16e-10;4!UBERON:0010133;1.16e-10;4!UBERON:0002784;1.16e-10;4!UBERON:0001894;2.41e-10;7!UBERON:0001905;4.36e-10;2!UBERON:0002702;4.36e-10;2!UBERON:0002757;4.36e-10;2!UBERON:0010134;4.36e-10;2!UBERON:0005408;4.36e-10;2!UBERON:0001899;4.36e-10;2!UBERON:0001870;5.47e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,7.33e-11,4;UBERON:0003296,9.89e-11,4;UBERON:0010133,9.89e-11,4;UBERON:0001894,1.64e-10,7;UBERON:0006222,1.64e-10,7;UBERON:0001905,3.83e-10,2;UBERON:0002757,3.83e-10,2;UBERON:0010134,3.83e-10,2;UBERON:0005408,3.83e-10,2;UBERON:0001899,3.83e-10,2;UBERON:0002702,4.81e-10,2;UBERON:0002346,2.50e-09,86;UBERON:0001049,1.03e-08,56;UBERON:0005068,1.03e-08,56;UBERON:0006241,1.03e-08,56;UBERON:0007135,1.03e-08,56;UBERON:0002780,1.08e-08,41;UBERON:0001890,1.08e-08,41;UBERON:0003080,1.08e-08,41;UBERON:0006240,1.08e-08,41;UBERON:0003075,1.32e-08,82;UBERON:0007284,1.32e-08,82;UBERON:0000073,8.39e-08,53;UBERON:0002616,8.39e-08,53;UBERON:0003056,9.53e-08,61;UBERON:0010371,3.68e-07,104;UBERON:0001870,5.83e-07,3 | |||
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|short_description=p@chr2:149052089..149052093,+ | |short_description=p@chr2:149052089..149052093,+ | ||
}} | }} |
Latest revision as of 01:08, 29 July 2015
Short description: | p@chr2:149052089..149052093, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:149052089..149052093, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 8.30e-07 | 3 |
smooth muscle cell of large intestine | 8.30e-07 | 3 |
smooth muscle cell of colon | 8.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 7.33e-11 | 4 |
gland of diencephalon | 9.89e-11 | 4 |
neuroendocrine gland | 9.89e-11 | 4 |
diencephalon | 1.64e-10 | 7 |
future diencephalon | 1.64e-10 | 7 |
pineal body | 3.83e-10 | 2 |
regional part of epithalamus | 3.83e-10 | 2 |
secretory circumventricular organ | 3.83e-10 | 2 |
circumventricular organ | 3.83e-10 | 2 |
epithalamus | 3.83e-10 | 2 |
middle frontal gyrus | 4.81e-10 | 2 |
neurectoderm | 2.50e-09 | 86 |
neural tube | 1.03e-08 | 56 |
neural rod | 1.03e-08 | 56 |
future spinal cord | 1.03e-08 | 56 |
neural keel | 1.03e-08 | 56 |
regional part of forebrain | 1.08e-08 | 41 |
forebrain | 1.08e-08 | 41 |
anterior neural tube | 1.08e-08 | 41 |
future forebrain | 1.08e-08 | 41 |
neural plate | 1.32e-08 | 82 |
presumptive neural plate | 1.32e-08 | 82 |
regional part of nervous system | 8.39e-08 | 53 |
regional part of brain | 8.39e-08 | 53 |
pre-chordal neural plate | 9.53e-08 | 61 |
ecto-epithelium | 3.68e-07 | 104 |
frontal cortex | 5.83e-07 | 3 |