FFCP PHASE1:Hg19::chr12:9801021..9801040,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374443 | |EntrezGene=374443 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=378bp_to_NR_002814,uc001qwe.1_5end | |association_with_transcript=378bp_to_NR_002814,uc001qwe.1_5end | ||
|cluster_id=chr12:9801021..9801040,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_9_at_LOC374443_5end | |description=CAGE_peak_9_at_LOC374443_5end | ||
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|ontology_enrichment_celltype=CL:0000738!2.67e-50!140;CL:0002087!6.82e-48!119;CL:0000037!1.01e-45!172;CL:0000566!1.01e-45!172;CL:0000988!2.02e-43!182;CL:0002031!9.25e-43!124;CL:0002032!3.62e-41!165;CL:0000837!3.62e-41!165;CL:0000542!2.56e-39!53;CL:0000051!2.56e-39!53;CL:0000838!3.81e-38!52;CL:0000945!7.02e-21!24;CL:0000826!7.02e-21!24;CL:0000791!6.00e-20!18;CL:0000789!6.00e-20!18;CL:0002420!6.00e-20!18;CL:0002419!6.00e-20!18;CL:0000790!6.00e-20!18;CL:0000236!1.07e-17!14;CL:0002057!4.17e-17!42;CL:0000084!2.11e-15!25;CL:0000827!2.11e-15!25;CL:0000860!2.86e-15!45;CL:0000625!1.58e-13!11;CL:0002009!5.63e-12!65;CL:0000766!5.35e-11!76;CL:0002194!7.25e-11!63;CL:0000576!7.25e-11!63;CL:0000040!7.25e-11!63;CL:0000559!7.25e-11!63;CL:0000557!7.51e-11!71;CL:0000763!9.28e-11!112;CL:0000049!9.28e-11!112;CL:0000134!1.35e-09!358;CL:0000839!1.56e-09!70;CL:0002320!7.03e-09!365;CL:0000219!1.15e-07!390;CL:0002393!1.59e-07!9;CL:0002397!1.59e-07!9;CL:0000624!3.33e-07!6 | |ontology_enrichment_celltype=CL:0000738!2.67e-50!140;CL:0002087!6.82e-48!119;CL:0000037!1.01e-45!172;CL:0000566!1.01e-45!172;CL:0000988!2.02e-43!182;CL:0002031!9.25e-43!124;CL:0002032!3.62e-41!165;CL:0000837!3.62e-41!165;CL:0000542!2.56e-39!53;CL:0000051!2.56e-39!53;CL:0000838!3.81e-38!52;CL:0000945!7.02e-21!24;CL:0000826!7.02e-21!24;CL:0000791!6.00e-20!18;CL:0000789!6.00e-20!18;CL:0002420!6.00e-20!18;CL:0002419!6.00e-20!18;CL:0000790!6.00e-20!18;CL:0000236!1.07e-17!14;CL:0002057!4.17e-17!42;CL:0000084!2.11e-15!25;CL:0000827!2.11e-15!25;CL:0000860!2.86e-15!45;CL:0000625!1.58e-13!11;CL:0002009!5.63e-12!65;CL:0000766!5.35e-11!76;CL:0002194!7.25e-11!63;CL:0000576!7.25e-11!63;CL:0000040!7.25e-11!63;CL:0000559!7.25e-11!63;CL:0000557!7.51e-11!71;CL:0000763!9.28e-11!112;CL:0000049!9.28e-11!112;CL:0000134!1.35e-09!358;CL:0000839!1.56e-09!70;CL:0002320!7.03e-09!365;CL:0000219!1.15e-07!390;CL:0002393!1.59e-07!9;CL:0002397!1.59e-07!9;CL:0000624!3.33e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.27e-36;13!CL:0000542;8.50e-35;53!CL:0000791;8.10e-34;18!CL:0000789;8.10e-34;18!CL:0002419;8.10e-34;18!CL:0000625;6.58e-28;11!CL:0000945;1.45e-27;24!CL:0000084;3.82e-23;25!CL:0002087;5.00e-13;104!CL:0000624;3.23e-10;6!CL:0000623;2.57e-08;3!CL:0000226;8.45e-08;3!CL:0000842;8.45e-08;3 | |ontology_enrichment_celltype_v019=CL:0000236;3.27e-36;13!CL:0000542;8.50e-35;53!CL:0000791;8.10e-34;18!CL:0000789;8.10e-34;18!CL:0002419;8.10e-34;18!CL:0000625;6.58e-28;11!CL:0000945;1.45e-27;24!CL:0000084;3.82e-23;25!CL:0002087;5.00e-13;104!CL:0000624;3.23e-10;6!CL:0000623;2.57e-08;3!CL:0000226;8.45e-08;3!CL:0000842;8.45e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.42e-59,53;CL:0000051,9.42e-59,53;CL:0000838,2.29e-56,52;CL:0002087,1.76e-35,115;CL:0000791,3.93e-34,18;CL:0000789,3.93e-34,18;CL:0002420,3.93e-34,18;CL:0002419,3.93e-34,18;CL:0000790,3.93e-34,18;CL:0000236,3.00e-33,14;CL:0000738,2.72e-31,136;CL:0000625,3.00e-28,11;CL:0000945,2.19e-27,24;CL:0000826,2.19e-27,24;CL:0002031,7.11e-27,120;CL:0000037,3.34e-24,168;CL:0000084,2.30e-23,25;CL:0000827,2.30e-23,25;CL:0000988,2.42e-22,177;CL:0002032,1.37e-19,161;CL:0000837,1.37e-19,161;CL:0000624,3.11e-10,6;CL:0000623,1.70e-08,3;CL:0000825,1.70e-08,3;CL:0000226,9.36e-08,3;CL:0000842,9.36e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;8.50e-35;53!CL:0000790;8.10e-34;18 | |ontology_enrichment_development_v019=CL:0000051;8.50e-35;53!CL:0000790;8.10e-34;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;8.36e-07;10 | |ontology_enrichment_disease_v019=DOID:0060058;8.36e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.61e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.84e-22!102;UBERON:0003061!9.84e-22!102;UBERON:0002193!2.90e-20!112;UBERON:0000178!2.02e-11!15;UBERON:0000179!2.02e-11!15;UBERON:0000463!2.02e-11!15;UBERON:0002371!7.58e-10!80;UBERON:0002405!4.32e-09!115;UBERON:0001474!2.06e-08!86;UBERON:0002384!6.33e-08!375;UBERON:0004177!1.47e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!9.84e-22!102;UBERON:0003061!9.84e-22!102;UBERON:0002193!2.90e-20!112;UBERON:0000178!2.02e-11!15;UBERON:0000179!2.02e-11!15;UBERON:0000463!2.02e-11!15;UBERON:0002371!7.58e-10!80;UBERON:0002405!4.32e-09!115;UBERON:0001474!2.06e-08!86;UBERON:0002384!6.33e-08!375;UBERON:0004177!1.47e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-15;15!UBERON:0000179;1.30e-15;15!UBERON:0000463;1.30e-15;15!UBERON:0002390;2.87e-10;32!UBERON:0002106;2.57e-08;3!UBERON:0002193;2.12e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-15;15!UBERON:0000179;1.30e-15;15!UBERON:0000463;1.30e-15;15!UBERON:0002390;2.87e-10;32!UBERON:0002106;2.57e-08;3!UBERON:0002193;2.12e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.31e-15,15;UBERON:0000179,1.31e-15,15;UBERON:0000463,1.31e-15,15;UBERON:0002106,3.01e-08,3;UBERON:0004854,3.01e-08,3;UBERON:0009034,3.01e-08,3;UBERON:0002095,3.01e-08,3;UBERON:0004782,3.01e-08,3;UBERON:0003281,3.01e-08,3;UBERON:0009664,3.01e-08,3;UBERON:0002296,3.01e-08,3;UBERON:0005602,3.01e-08,3;UBERON:0001179,3.01e-08,3;UBERON:0006293,3.01e-08,3 | |||
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| ||
|short_description=p9@LOC374443 | |short_description=p9@LOC374443 | ||
}} | }} |
Latest revision as of 05:26, 16 September 2015
Short description: | p9@LOC374443 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LOC374443_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 378bp_to_NR_002814, uc001qwe.1_5end |
EntrezGene: | LOC374443 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.42e-59 | 53 |
common lymphoid progenitor | 9.42e-59 | 53 |
lymphoid lineage restricted progenitor cell | 2.29e-56 | 52 |
nongranular leukocyte | 1.76e-35 | 115 |
mature alpha-beta T cell | 3.93e-34 | 18 |
alpha-beta T cell | 3.93e-34 | 18 |
immature T cell | 3.93e-34 | 18 |
mature T cell | 3.93e-34 | 18 |
immature alpha-beta T cell | 3.93e-34 | 18 |
B cell | 3.00e-33 | 14 |
leukocyte | 2.72e-31 | 136 |
CD8-positive, alpha-beta T cell | 3.00e-28 | 11 |
lymphocyte of B lineage | 2.19e-27 | 24 |
pro-B cell | 2.19e-27 | 24 |
hematopoietic lineage restricted progenitor cell | 7.11e-27 | 120 |
hematopoietic stem cell | 3.34e-24 | 168 |
T cell | 2.30e-23 | 25 |
pro-T cell | 2.30e-23 | 25 |
hematopoietic cell | 2.42e-22 | 177 |
hematopoietic oligopotent progenitor cell | 1.37e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-19 | 161 |
CD4-positive, alpha-beta T cell | 3.11e-10 | 6 |
natural killer cell | 1.70e-08 | 3 |
pro-NK cell | 1.70e-08 | 3 |
single nucleate cell | 9.36e-08 | 3 |
mononuclear cell | 9.36e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.31e-15 | 15 |
haemolymphatic fluid | 1.31e-15 | 15 |
organism substance | 1.31e-15 | 15 |
spleen | 3.01e-08 | 3 |
gastrointestinal system mesentery | 3.01e-08 | 3 |
stomach region | 3.01e-08 | 3 |
mesentery | 3.01e-08 | 3 |
gastrointestinal system serosa | 3.01e-08 | 3 |
mesentery of stomach | 3.01e-08 | 3 |
gut mesentery | 3.01e-08 | 3 |
dorsal mesentery | 3.01e-08 | 3 |
dorsal mesogastrium | 3.01e-08 | 3 |
peritoneal cavity | 3.01e-08 | 3 |
spleen primordium | 3.01e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.61e-07 | 10 |