FFCP PHASE1:Hg19::chr4:74274319..74274349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000505649_5end | |association_with_transcript=-5bp_to_ENST00000505649_5end | ||
|cluster_id=chr4:74274319..74274349,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_11_at_ALB_5end | |description=CAGE_peak_11_at_ALB_5end | ||
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|ontology_enrichment_celltype=CL:0000181!7.04e-26!12;CL:0000417!7.04e-26!12;CL:0000668!7.04e-26!12;CL:0000414!7.04e-26!12;CL:0000412!7.04e-26!12;CL:0000182!7.04e-26!12;CL:0000223!3.97e-09!59 | |ontology_enrichment_celltype=CL:0000181!7.04e-26!12;CL:0000417!7.04e-26!12;CL:0000668!7.04e-26!12;CL:0000414!7.04e-26!12;CL:0000412!7.04e-26!12;CL:0000182!7.04e-26!12;CL:0000223!3.97e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.09e-42;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.09e-42;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-42,12;CL:0000223,1.56e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.40e-32;11!UBERON:0009497;2.13e-27;13!UBERON:0001041;6.57e-12;30!UBERON:0003104;1.64e-11;31!CL:0000223;9.43e-09;58 | |ontology_enrichment_development_v019=UBERON:0004161;2.40e-32;11!UBERON:0009497;2.13e-27;13!UBERON:0001041;6.57e-12;30!UBERON:0003104;1.64e-11;31!CL:0000223;9.43e-09;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p11@ALB | |short_description=p11@ALB | ||
}} | }} |
Latest revision as of 12:38, 18 September 2015
Short description: | p11@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -5bp_to_ENST00000505649_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-42 | 12 |
endodermal cell | 1.56e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.27e-47 | 19 |
digestive gland | 2.27e-47 | 19 |
liver bud | 2.27e-47 | 19 |
hepatic diverticulum | 7.55e-41 | 22 |
liver primordium | 7.55e-41 | 22 |
digestive tract diverticulum | 4.73e-39 | 23 |
epithelial sac | 6.89e-36 | 25 |
epithelium of foregut-midgut junction | 6.89e-36 | 25 |
anatomical boundary | 6.89e-36 | 25 |
hepatobiliary system | 6.89e-36 | 25 |
foregut-midgut junction | 6.89e-36 | 25 |
septum transversum | 6.89e-36 | 25 |
sac | 1.73e-34 | 26 |
exocrine gland | 7.68e-29 | 31 |
exocrine system | 7.68e-29 | 31 |
endocrine gland | 1.76e-25 | 35 |
endocrine system | 8.17e-25 | 45 |
gut epithelium | 1.54e-20 | 54 |
abdomen element | 2.68e-16 | 54 |
abdominal segment element | 2.68e-16 | 54 |
gland | 7.34e-15 | 59 |
abdominal segment of trunk | 1.33e-14 | 60 |
abdomen | 1.33e-14 | 60 |
endo-epithelium | 3.07e-13 | 82 |
trunk region element | 1.39e-10 | 101 |
foregut | 7.56e-10 | 87 |
subdivision of digestive tract | 7.76e-09 | 118 |
subdivision of trunk | 1.77e-07 | 112 |
epithelial tube | 4.01e-07 | 117 |
digestive system | 5.07e-07 | 145 |
digestive tract | 5.07e-07 | 145 |
primitive gut | 5.07e-07 | 145 |
unilaminar epithelium | 6.50e-07 | 148 |
trunk mesenchyme | 8.47e-07 | 122 |