FFCP PHASE1:Hg19::chr10:69455965..69455974,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29119 | |EntrezGene=29119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2511 | |HGNC=2511 | ||
|TSSclassifier=strong | |||
|UniProt=A8K141,Q9UI47 | |UniProt=A8K141,Q9UI47 | ||
|association_with_transcript=-16bp_to_NM_013266,uc001jmw.2_5end | |association_with_transcript=-16bp_to_NM_013266,uc001jmw.2_5end | ||
|cluster_id=chr10:69455965..69455974,- | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_6_at_CTNNA3_5end | |description=CAGE_peak_6_at_CTNNA3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
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|ontology_enrichment_disease=DOID:114!4.16e-12!2;DOID:178!6.59e-07!1;DOID:326!6.59e-07!1;DOID:3978!6.59e-07!1;DOID:3394!6.59e-07!1;DOID:5844!6.59e-07!1 | |ontology_enrichment_disease=DOID:114!4.16e-12!2;DOID:178!6.59e-07!1;DOID:326!6.59e-07!1;DOID:3978!6.59e-07!1;DOID:3394!6.59e-07!1;DOID:5844!6.59e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:114;6.35e-57;2!DOID:178;2.05e-29;1!DOID:326;2.05e-29;1!DOID:3978;2.05e-29;1!DOID:3394;2.05e-29;1!DOID:5844;2.05e-29;1!DOID:1287;4.21e-29;4 | |ontology_enrichment_disease_v019=DOID:114;6.35e-57;2!DOID:178;2.05e-29;1!DOID:326;2.05e-29;1!DOID:3978;2.05e-29;1!DOID:3394;2.05e-29;1!DOID:5844;2.05e-29;1!DOID:1287;4.21e-29;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,8.47e-57,2;DOID:178,1.78e-29,1;DOID:326,1.78e-29,1;DOID:3978,1.78e-29,1;DOID:3394,1.78e-29,1;DOID:5844,1.78e-29,1;DOID:1287,4.86e-29,4 | |||
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|short_description=p6@CTNNA3 | |short_description=p6@CTNNA3 | ||
}} | }} |
Latest revision as of 22:07, 18 September 2015
Short description: | p6@CTNNA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CTNNA3_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -16bp_to_NM_013266, uc001jmw.2_5end |
EntrezGene: | CTNNA3 |
HGNC: | 2511 |
UniProt: | A8K141Q9UI47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.01e-38 | 3 |
primary circulatory organ | 7.95e-38 | 27 |
heart left ventricle | 9.99e-30 | 1 |
cardiac ventricle | 9.99e-30 | 1 |
future cardiac ventricle | 9.99e-30 | 1 |
left cardiac atrium | 1.33e-29 | 1 |
pulmonary valve | 2.37e-29 | 1 |
semi-lunar valve | 2.37e-29 | 1 |
heart | 1.92e-19 | 24 |
primitive heart tube | 1.92e-19 | 24 |
primary heart field | 1.92e-19 | 24 |
anterior lateral plate mesoderm | 1.92e-19 | 24 |
heart tube | 1.92e-19 | 24 |
heart primordium | 1.92e-19 | 24 |
cardiac mesoderm | 1.92e-19 | 24 |
cardiogenic plate | 1.92e-19 | 24 |
heart rudiment | 1.92e-19 | 24 |
cardiac atrium | 1.54e-15 | 2 |
future cardiac atrium | 1.54e-15 | 2 |
compound organ | 2.96e-15 | 68 |
valve | 9.90e-11 | 3 |
cardiac mesenchyme | 9.90e-11 | 3 |
cardial valve | 9.90e-11 | 3 |
tunica intima | 9.90e-11 | 3 |
heart layer | 9.90e-11 | 3 |
endocardium | 9.90e-11 | 3 |
endocardial cushion | 9.90e-11 | 3 |
presumptive endocardium | 9.90e-11 | 3 |
circulatory system | 2.37e-09 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.47e-57 | 2 |
vascular disease | 1.78e-29 | 1 |
ischemia | 1.78e-29 | 1 |
extrinsic cardiomyopathy | 1.78e-29 | 1 |
myocardial ischemia | 1.78e-29 | 1 |
myocardial infarction | 1.78e-29 | 1 |
cardiovascular system disease | 4.86e-29 | 4 |