FFCP PHASE1:Hg19::chr20:32150316..32150339,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9139 | |EntrezGene=9139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1536 | |HGNC=1536 | ||
|TSSclassifier=strong | |||
|UniProt=A2A2D9 | |UniProt=A2A2D9 | ||
|association_with_transcript=-32bp_to_ENST00000454955_5end | |association_with_transcript=-32bp_to_ENST00000454955_5end | ||
|cluster_id=chr20:32150316..32150339,+ | |||
|coexpression_cluster_id=C4024 | |coexpression_cluster_id=C4024 | ||
|description=CAGE_peak_4_at_CBFA2T2_5end | |description=CAGE_peak_4_at_CBFA2T2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.74e-11;2!CL:0000333;2.97e-10;5 | |ontology_enrichment_celltype_v019=CL:0000047;2.74e-11;2!CL:0000333;2.97e-10;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.41e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.58e-07;1 | |ontology_enrichment_development_v019=UBERON:0005425;6.58e-07;1 | ||
|ontology_enrichment_disease=DOID:171!9.16e-07!10 | |ontology_enrichment_disease=DOID:171!9.16e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:4362;3.16e-10;5!DOID:171;1.27e-08;10!DOID:169;1.29e-08;6 | |ontology_enrichment_disease_v019=DOID:4362;3.16e-10;5!DOID:171;1.27e-08;10!DOID:169;1.29e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,2.35e-10,5;DOID:171,1.16e-08,10;DOID:169,1.24e-08,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002298;1.40e-13;6!UBERON:0001016;2.86e-12;83!UBERON:0005162;7.30e-12;2!UBERON:0000122;7.30e-12;2!UBERON:0001897;5.22e-11;2!UBERON:0010225;5.22e-11;2!UBERON:0000013;2.97e-10;5!UBERON:0002410;2.97e-10;5!UBERON:0000073;5.55e-10;53!UBERON:0002616;5.55e-10;53!UBERON:0000010;8.08e-10;8!UBERON:0001017;1.10e-09;75!UBERON:0004732;1.15e-09;13!UBERON:0000002;1.36e-08;6!UBERON:0001560;1.36e-08;6!UBERON:0002780;3.86e-08;41!UBERON:0001890;3.86e-08;41!UBERON:0000988;1.27e-07;3!UBERON:0001896;1.27e-07;3!UBERON:0005290;1.27e-07;3!UBERON:0000941;6.58e-07;1!UBERON:0001785;6.58e-07;1!UBERON:0002464;6.58e-07;1!UBERON:0004904;6.58e-07;1!UBERON:0001021;6.58e-07;1!UBERON:0004733;7.59e-07;12!UBERON:0002028;7.59e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0002298;1.40e-13;6!UBERON:0001016;2.86e-12;83!UBERON:0005162;7.30e-12;2!UBERON:0000122;7.30e-12;2!UBERON:0001897;5.22e-11;2!UBERON:0010225;5.22e-11;2!UBERON:0000013;2.97e-10;5!UBERON:0002410;2.97e-10;5!UBERON:0000073;5.55e-10;53!UBERON:0002616;5.55e-10;53!UBERON:0000010;8.08e-10;8!UBERON:0001017;1.10e-09;75!UBERON:0004732;1.15e-09;13!UBERON:0000002;1.36e-08;6!UBERON:0001560;1.36e-08;6!UBERON:0002780;3.86e-08;41!UBERON:0001890;3.86e-08;41!UBERON:0000988;1.27e-07;3!UBERON:0001896;1.27e-07;3!UBERON:0005290;1.27e-07;3!UBERON:0000941;6.58e-07;1!UBERON:0001785;6.58e-07;1!UBERON:0002464;6.58e-07;1!UBERON:0004904;6.58e-07;1!UBERON:0001021;6.58e-07;1!UBERON:0004733;7.59e-07;12!UBERON:0002028;7.59e-07;12 | ||
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|short_description=p4@CBFA2T2 | |short_description=p4@CBFA2T2 | ||
}} | }} |
Latest revision as of 05:33, 25 September 2015
Short description: | p4@CBFA2T2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CBFA2T2_5end |
Coexpression cluster: | C4024_small_argyrophil_merkel_gastrointestinal_cervical_neuroblastoma_smallcell |
Association with transcript: | -32bp_to_ENST00000454955_5end |
EntrezGene: | CBFA2T2 |
HGNC: | 1536 |
UniProt: | A2A2D9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.41e-10 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.35e-10 | 5 |
neuroectodermal tumor | 1.16e-08 | 10 |
neuroendocrine tumor | 1.24e-08 | 6 |