FFCP PHASE1:Hg19::chr9:12698499..12698524,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000381142_5end | |association_with_transcript=0bp_to_ENST00000381142_5end | ||
|cluster_id=chr9:12698499..12698524,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_9_at_TYRP1_5end | |description=CAGE_peak_9_at_TYRP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!4.94e-13!10;CL:0000541!4.94e-13!10;CL:0000147!2.26e-11!14;CL:0000077!2.40e-09!19;CL:0002567!3.71e-09!3;CL:0000174!2.09e-08!3 | |ontology_enrichment_celltype=CL:0000148!4.94e-13!10;CL:0000541!4.94e-13!10;CL:0000147!2.26e-11!14;CL:0000077!2.40e-09!19;CL:0002567!3.71e-09!3;CL:0000174!2.09e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.26e-40;10!CL:0000147;2.50e-28;14!CL:0002567;1.78e-25;3!CL:0000710;1.31e-19;20!CL:0000075;2.52e-14;27!CL:0000077;1.94e-10;19!CL:0002077;5.22e-10;34!CL:0002566;1.43e-09;1!CL:0002568;1.43e-09;1 | |ontology_enrichment_celltype_v019=CL:0000148;6.26e-40;10!CL:0000147;2.50e-28;14!CL:0002567;1.78e-25;3!CL:0000710;1.31e-19;20!CL:0000075;2.52e-14;27!CL:0000077;1.94e-10;19!CL:0002077;5.22e-10;34!CL:0002566;1.43e-09;1!CL:0002568;1.43e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.64e-40,10;CL:0000541,6.64e-40,10;CL:0000147,2.61e-28,14;CL:0002567,2.01e-25,3;CL:0000710,1.35e-19,20;CL:0000075,2.57e-14,27;CL:0000333,3.32e-11,41;CL:0002077,3.34e-11,34;CL:0000077,1.83e-10,19;CL:0002568,1.32e-09,1;CL:0002566,1.43e-09,1;CL:0000133,1.41e-07,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.77e-10!14 | |ontology_enrichment_disease=DOID:2394!2.77e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:1909;7.91e-17;2 | |ontology_enrichment_disease_v019=DOID:1909;7.91e-17;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,5.51e-17,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002119;1.00e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0002119;1.00e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,1.04e-08,4 | |||
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| ||
|short_description=p9@TYRP1 | |short_description=p9@TYRP1 | ||
}} | }} |
Latest revision as of 23:47, 24 September 2015
Short description: | p9@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000381142_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.64e-40 | 10 |
melanoblast | 6.64e-40 | 10 |
pigment cell | 2.61e-28 | 14 |
light melanocyte | 2.01e-25 | 3 |
neurecto-epithelial cell | 1.35e-19 | 20 |
columnar/cuboidal epithelial cell | 2.57e-14 | 27 |
migratory neural crest cell | 3.32e-11 | 41 |
ecto-epithelial cell | 3.34e-11 | 34 |
mesothelial cell | 1.83e-10 | 19 |
mesenchymal stem cell of Wharton's jelly | 1.32e-09 | 1 |
dark melanocyte | 1.43e-09 | 1 |
neurectodermal cell | 1.41e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
left ovary | 1.04e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.51e-17 | 2 |