FFCP PHASE1:Hg19::chr8:107561486..107561489,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:107561486..107561489,+ | |||
|description=CAGE_peak_at_chr8:107561486..107561489,+ | |description=CAGE_peak_at_chr8:107561486..107561489,+ | ||
|id=chr8:107561486..107561489,+ | |id=chr8:107561486..107561489,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;3.99e-50;1!CL:0002372;3.99e-50;1!CL:0000056;1.13e-13;4!CL:0000737;1.13e-13;4!CL:0000138;1.44e-09;6!CL:0000680;2.18e-08;7!CL:0000153;8.37e-07;9!CL:0000447;8.37e-07;9!CL:0000188;8.37e-07;9 | |ontology_enrichment_celltype_v019=CL:0000228;3.99e-50;1!CL:0002372;3.99e-50;1!CL:0000056;1.13e-13;4!CL:0000737;1.13e-13;4!CL:0000138;1.44e-09;6!CL:0000680;2.18e-08;7!CL:0000153;8.37e-07;9!CL:0000447;8.37e-07;9!CL:0000188;8.37e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.99e-50,1;CL:0002372,3.99e-50,1;CL:0000737,1.13e-13,4;CL:0000515,1.13e-13,4;CL:0000058,1.57e-09,6;CL:0000138,1.57e-09,6;CL:0000188,8.37e-07,9;CL:0000153,8.85e-07,9;CL:0000447,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000515;1.13e-13;4 | |ontology_enrichment_development_v019=CL:0000515;1.13e-13;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;3.99e-50;1!DOID:4549;3.99e-50;1!DOID:5861;3.99e-50;1!DOID:6496;3.99e-50;1!DOID:201;1.44e-09;6!DOID:0060100;1.44e-09;6 | |ontology_enrichment_disease_v019=DOID:3371;3.99e-50;1!DOID:4549;3.99e-50;1!DOID:5861;3.99e-50;1!DOID:6496;3.99e-50;1!DOID:201;1.44e-09;6!DOID:0060100;1.44e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,6.58e-50,1;DOID:4549,6.58e-50,1;DOID:5861,6.58e-50,1;DOID:6496,6.58e-50,1;DOID:201,1.57e-09,6;DOID:0060100,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.41e-12!57;UBERON:0005068!2.41e-12!57;UBERON:0006241!2.41e-12!57;UBERON:0007135!2.41e-12!57;UBERON:0000955!1.12e-11!69;UBERON:0006238!1.12e-11!69;UBERON:0001017!1.40e-11!82;UBERON:0002020!1.43e-11!34;UBERON:0003528!1.43e-11!34;UBERON:0002346!8.56e-11!90;UBERON:0002780!1.03e-10!41;UBERON:0001890!1.03e-10!41;UBERON:0006240!1.03e-10!41;UBERON:0005743!1.14e-10!86;UBERON:0002616!1.66e-10!59;UBERON:0003080!2.43e-10!42;UBERON:0002619!4.07e-10!22;UBERON:0003075!7.23e-10!86;UBERON:0007284!7.23e-10!86;UBERON:0001869!8.21e-10!32;UBERON:0007023!1.00e-09!115;UBERON:0000073!1.14e-09!94;UBERON:0001016!1.14e-09!94;UBERON:0001950!1.46e-09!20;UBERON:0002791!2.12e-09!33;UBERON:0001893!5.18e-09!34;UBERON:0000033!7.05e-09!123;UBERON:0000153!1.24e-08!129;UBERON:0007811!1.24e-08!129;UBERON:0000956!1.43e-08!25;UBERON:0000203!1.43e-08!25;UBERON:0003056!5.19e-08!61;UBERON:0000924!9.46e-08!173;UBERON:0006601!9.46e-08!173;UBERON:0004121!4.64e-07!169 | |ontology_enrichment_uberon=UBERON:0001049!2.41e-12!57;UBERON:0005068!2.41e-12!57;UBERON:0006241!2.41e-12!57;UBERON:0007135!2.41e-12!57;UBERON:0000955!1.12e-11!69;UBERON:0006238!1.12e-11!69;UBERON:0001017!1.40e-11!82;UBERON:0002020!1.43e-11!34;UBERON:0003528!1.43e-11!34;UBERON:0002346!8.56e-11!90;UBERON:0002780!1.03e-10!41;UBERON:0001890!1.03e-10!41;UBERON:0006240!1.03e-10!41;UBERON:0005743!1.14e-10!86;UBERON:0002616!1.66e-10!59;UBERON:0003080!2.43e-10!42;UBERON:0002619!4.07e-10!22;UBERON:0003075!7.23e-10!86;UBERON:0007284!7.23e-10!86;UBERON:0001869!8.21e-10!32;UBERON:0007023!1.00e-09!115;UBERON:0000073!1.14e-09!94;UBERON:0001016!1.14e-09!94;UBERON:0001950!1.46e-09!20;UBERON:0002791!2.12e-09!33;UBERON:0001893!5.18e-09!34;UBERON:0000033!7.05e-09!123;UBERON:0000153!1.24e-08!129;UBERON:0007811!1.24e-08!129;UBERON:0000956!1.43e-08!25;UBERON:0000203!1.43e-08!25;UBERON:0003056!5.19e-08!61;UBERON:0000924!9.46e-08!173;UBERON:0006601!9.46e-08!173;UBERON:0004121!4.64e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.38e-99;2!UBERON:0002757;9.38e-99;2!UBERON:0010134;9.38e-99;2!UBERON:0005408;9.38e-99;2!UBERON:0001899;9.38e-99;2!UBERON:0003296;4.00e-50;4!UBERON:0010133;4.00e-50;4!UBERON:0002784;4.00e-50;4!UBERON:0001894;3.16e-29;7!UBERON:0002418;9.45e-18;3!UBERON:0004755;9.45e-18;3 | |ontology_enrichment_uberon_v019=UBERON:0001905;9.38e-99;2!UBERON:0002757;9.38e-99;2!UBERON:0010134;9.38e-99;2!UBERON:0005408;9.38e-99;2!UBERON:0001899;9.38e-99;2!UBERON:0003296;4.00e-50;4!UBERON:0010133;4.00e-50;4!UBERON:0002784;4.00e-50;4!UBERON:0001894;3.16e-29;7!UBERON:0002418;9.45e-18;3!UBERON:0004755;9.45e-18;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.68e-99,2;UBERON:0002757,5.68e-99,2;UBERON:0010134,5.68e-99,2;UBERON:0005408,5.68e-99,2;UBERON:0001899,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0002784,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0002418,1.12e-17,3;UBERON:0004755,1.12e-17,3;UBERON:0002368,9.98e-07,35 | |||
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|short_description=p@chr8:107561486..107561489,+ | |short_description=p@chr8:107561486..107561489,+ | ||
}} | }} |
Latest revision as of 13:55, 31 July 2015
Short description: | p@chr8:107561486..107561489, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:107561486..107561489, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.99e-50 | 1 |
myotube | 3.99e-50 | 1 |
striated muscle cell | 1.13e-13 | 4 |
skeletal muscle myoblast | 1.13e-13 | 4 |
chondroblast | 1.57e-09 | 6 |
chondrocyte | 1.57e-09 | 6 |
cell of skeletal muscle | 8.37e-07 | 9 |
GAG secreting cell | 8.85e-07 | 9 |
carbohydrate secreting cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.68e-99 | 2 |
regional part of epithalamus | 5.68e-99 | 2 |
secretory circumventricular organ | 5.68e-99 | 2 |
circumventricular organ | 5.68e-99 | 2 |
epithalamus | 5.68e-99 | 2 |
gland of diencephalon | 3.11e-50 | 4 |
neuroendocrine gland | 3.11e-50 | 4 |
regional part of diencephalon | 3.11e-50 | 4 |
diencephalon | 2.74e-29 | 7 |
future diencephalon | 2.74e-29 | 7 |
cartilage tissue | 1.12e-17 | 3 |
skeletal tissue | 1.12e-17 | 3 |
endocrine gland | 9.98e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.58e-50 | 1 |
extraosseous chondrosarcoma | 6.58e-50 | 1 |
myxoid chondrosarcoma | 6.58e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 6.58e-50 | 1 |
connective tissue cancer | 1.57e-09 | 6 |
musculoskeletal system cancer | 1.57e-09 | 6 |