FFCP PHASE1:Hg19::chr1:44584544..44584557,+: Difference between revisions
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|id=chr1:44584544..44584557,+
|short_description=p4@KLF17
|description=CAGE_peak_4_at_KLF17_5end
|association_with_transcript=2bp_to_ENST00000476802_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=128209 | |EntrezGene=128209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18830 | |HGNC=18830 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000476802_5end | |||
|cluster_id=chr1:44584544..44584557,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_KLF17_5end | |||
|id=chr1:44584544..44584557,+ | |||
|ontology_enrichment_celltype=CL:0000039!9.27e-43!7;CL:0000586!9.27e-43!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.27e-43;7!CL:0000586;9.27e-43;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.27e-43,7;CL:0000586,9.27e-43,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.60e-82;10!UBERON:0005564;3.60e-82;10!UBERON:0006603;1.84e-08;65 | |||
|ontology_enrichment_disease=DOID:3095!3.13e-14!22;DOID:2994!3.13e-14!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.13e-14;22!DOID:2994;3.13e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.13e-14,22;DOID:2994,3.13e-14,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.77e-102!8;UBERON:0003135!8.79e-75!11;UBERON:0000991!1.47e-39!21;UBERON:0009196!1.47e-39!21;UBERON:0009117!1.47e-39!21;UBERON:0005564!1.47e-39!21;UBERON:0004176!8.52e-38!22;UBERON:0003101!8.52e-38!22;UBERON:0000079!8.52e-38!22;UBERON:0002323!2.06e-18!46;UBERON:0003133!1.14e-17!48;UBERON:0004458!2.55e-17!49;UBERON:0005156!1.78e-14!59;UBERON:0000990!1.78e-14!59;UBERON:0003886!1.37e-13!63;UBERON:0002553!2.81e-12!70;UBERON:0000464!2.12e-08!104;UBERON:0000466!5.41e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.77e-102;8!UBERON:0003135;8.79e-75;11!UBERON:0000991;1.47e-39;21!UBERON:0003101;8.52e-38;22!UBERON:0000079;8.52e-38;22!UBERON:0003133;9.42e-16;44!UBERON:0002323;1.58e-15;45!UBERON:0002553;5.06e-11;52!UBERON:0005156;3.69e-10;59!UBERON:0000990;3.69e-10;59!UBERON:0004458;5.07e-08;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.77e-102,8;UBERON:0003135,8.79e-75,11;UBERON:0000991,1.47e-39,21;UBERON:0009196,1.47e-39,21;UBERON:0009117,1.47e-39,21;UBERON:0005564,1.47e-39,21;UBERON:0004176,8.52e-38,22;UBERON:0003101,8.52e-38,22;UBERON:0000079,8.52e-38,22;UBERON:0002323,2.06e-18,46;UBERON:0003133,1.14e-17,48;UBERON:0004458,2.55e-17,49;UBERON:0003886,9.10e-16,54;UBERON:0005156,1.78e-14,59;UBERON:0000990,1.78e-14,59;UBERON:0002553,5.12e-14,61 | |||
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|short_description=p4@KLF17 | |||
}} | }} |
Latest revision as of 05:53, 18 September 2015
Short description: | p4@KLF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KLF17_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 2bp_to_ENST00000476802_5end |
EntrezGene: | KLF17 |
HGNC: | 18830 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.27e-43 | 7 |
germ cell | 9.27e-43 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.77e-102 | 8 |
male reproductive organ | 8.79e-75 | 11 |
gonad | 1.47e-39 | 21 |
indifferent external genitalia | 1.47e-39 | 21 |
indifferent gonad | 1.47e-39 | 21 |
gonad primordium | 1.47e-39 | 21 |
external genitalia | 8.52e-38 | 22 |
male organism | 8.52e-38 | 22 |
male reproductive system | 8.52e-38 | 22 |
body cavity | 2.06e-18 | 46 |
reproductive organ | 1.14e-17 | 48 |
body cavity or lining | 2.55e-17 | 49 |
body cavity precursor | 9.10e-16 | 54 |
reproductive structure | 1.78e-14 | 59 |
reproductive system | 1.78e-14 | 59 |
anatomical cavity | 5.12e-14 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.13e-14 | 22 |
germ cell cancer | 3.13e-14 | 22 |