FFCP PHASE1:Hg19::chr22:33255889..33255896,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=426bp_to_X80791_5end | |association_with_transcript=426bp_to_X80791_5end | ||
|cluster_id=chr22:33255889..33255896,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_16_at_TIMP3_5end | |description=CAGE_peak_16_at_TIMP3_5end | ||
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|ontology_enrichment_celltype=CL:0002334!9.72e-12!12;CL:0000057!7.96e-10!75 | |ontology_enrichment_celltype=CL:0002334!9.72e-12!12;CL:0000057!7.96e-10!75 | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.01e-19;12!CL:0000349;1.56e-11;19!CL:0002541;5.94e-11;3!CL:0002595;1.07e-09;5!CL:0002579;1.60e-09;3!CL:0000134;1.36e-08;55!CL:0000136;1.45e-07;13!CL:0000034;2.79e-07;69!CL:0002593;3.32e-07;2!CL:0000723;3.80e-07;61!CL:0002583;6.46e-07;2 | |ontology_enrichment_celltype_v019=CL:0002334;8.01e-19;12!CL:0000349;1.56e-11;19!CL:0002541;5.94e-11;3!CL:0002595;1.07e-09;5!CL:0002579;1.60e-09;3!CL:0000134;1.36e-08;55!CL:0000136;1.45e-07;13!CL:0000034;2.79e-07;69!CL:0002593;3.32e-07;2!CL:0000723;3.80e-07;61!CL:0002583;6.46e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.79e-19,12;CL:0000349,1.03e-11,19;CL:0000136,3.88e-11,15;CL:0002541,5.99e-11,3;CL:0002595,7.60e-10,5;CL:0002579,7.86e-10,3;CL:0002593,2.16e-07,2;CL:0002583,5.59e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;2.30e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;2.30e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.84e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004923!2.80e-10!57;UBERON:0005631!7.52e-08!14;UBERON:0000158!7.52e-08!14;UBERON:0003124!1.33e-07!7;UBERON:0004457!5.27e-07!12;UBERON:0000042!5.27e-07!12 | |ontology_enrichment_uberon=UBERON:0004923!2.80e-10!57;UBERON:0005631!7.52e-08!14;UBERON:0000158!7.52e-08!14;UBERON:0003124!1.33e-07!7;UBERON:0004457!5.27e-07!12;UBERON:0000042!5.27e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.65e-15;9!UBERON:0000042;8.65e-15;9!UBERON:0003688;5.78e-12;6!UBERON:0002358;5.78e-12;6!UBERON:0003684;5.78e-12;6!UBERON:0001178;5.78e-12;6!UBERON:0005631;3.94e-11;10!UBERON:0000158;3.94e-11;10!UBERON:0003124;5.94e-11;3!UBERON:0000920;5.94e-11;3!UBERON:0000478;6.95e-11;24!UBERON:0003834;1.07e-09;5!UBERON:0001533;1.07e-09;5!UBERON:0005406;2.02e-07;2!UBERON:0002456;3.32e-07;2!UBERON:0001987;3.92e-07;4!UBERON:0001013;4.12e-07;14!UBERON:0003513;6.31e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0004457;8.65e-15;9!UBERON:0000042;8.65e-15;9!UBERON:0003688;5.78e-12;6!UBERON:0002358;5.78e-12;6!UBERON:0003684;5.78e-12;6!UBERON:0001178;5.78e-12;6!UBERON:0005631;3.94e-11;10!UBERON:0000158;3.94e-11;10!UBERON:0003124;5.94e-11;3!UBERON:0000920;5.94e-11;3!UBERON:0000478;6.95e-11;24!UBERON:0003834;1.07e-09;5!UBERON:0001533;1.07e-09;5!UBERON:0005406;2.02e-07;2!UBERON:0002456;3.32e-07;2!UBERON:0001987;3.92e-07;4!UBERON:0001013;4.12e-07;14!UBERON:0003513;6.31e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.23e-16,14;UBERON:0000158,1.23e-16,14;UBERON:0003124,8.17e-16,7;UBERON:0004923,1.03e-14,66;UBERON:0003688,5.56e-12,6;UBERON:0002358,5.56e-12,6;UBERON:0003684,5.56e-12,6;UBERON:0001178,5.56e-12,6;UBERON:0000478,5.26e-11,24;UBERON:0000920,5.99e-11,3;UBERON:0004457,7.08e-11,12;UBERON:0000042,7.08e-11,12;UBERON:0003834,7.60e-10,5;UBERON:0001533,7.60e-10,5;UBERON:0005406,1.53e-07,2;UBERON:0002456,2.16e-07,2;UBERON:0001013,3.82e-07,14;UBERON:0001987,3.94e-07,4;UBERON:0004340,3.94e-07,4;UBERON:0003513,4.98e-07,7;UBERON:0002199,8.84e-07,46;UBERON:0002416,8.84e-07,46 | |||
|phase1_expression=0.181678379270557,1.92690471501885,1.26858963686374,1.0007329835313,0.893922188854576,3.48935409640147,2.53299878168311,0,0,0,0,1.52908960491121,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0.795285947051099,0.973269740605272,0.0945348171640679,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0.436094052142534,4.47274756525787,0.25326102332916,0,1.43418310374407,0.354668382198357,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.245668634623536,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0.612975591598039,0.150238058906597,0.113432183160021,2.33206526395521,0,1.05965950579781,2.40072876867522,0.515262646192195,0.515281080091258,1.30281799432113,1.5189869901714,0.584622030967192,0.504867548488229,0.552299391853796,0.646584227275248,0.710019185033229,0.503760491138201,0.67824236924195,0,0,0,0,0,0,0,0,0,0,1.28648187638577,2.76269842704961,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0,0.977424915930974,0,0,0,0,0.433099343283221,0,0,0,0,0,0,0,0,0,0.425325291727159,0.447792613514241,0,0,0,0.176096868026452,0,0.432359860250884,0.50496973370552,0,0.381988425558278,0,0,0.616964956219941,0.300343057843917,0,0.560655421726804,0,0.5867062865676,1.55126058909333,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.07057393278297,0.630809660135739,0.117141414992713,0,2.27407504055985,1.03473071292505,0,0,0.260650843404249,0.783204629850962,0.343143423810856,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,2.23297027036899,0.920771839728375,3.08726103876381,1.53766979106841,3.07024349440022,1.93024705372329,2.96836132889982,2.15893571323718,1.59805552781814,0.657017248110473,0.519254429183621,1.39452454151951,0.120859449591622,0,0.276242966807689,0.229628896329213,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.656029291399411,2.60302715731442,0.309123034943167,0,0,0,0,0,0.290012154876366,0.308097234229289,0,0,0,0,0.170453254832202,0,0,0.192190067365106,0,0.10115778085555,0.464845549297286,5.03699754929024,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,1.70599442741899,9.50851320810799,0,0.707027159768564,0,0.551365343546124,1.32687795048244,1.31535265576129,0,0.655894752046633,0,0,0,0,0.196498082026242,0,0.354761064070598,1.05553817648832,1.97576935775941,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.439524537815682,0,0,0,2.62618933211459,0,3.68592842519078,0,0,0,0,0,0.19924798825107,0,0,0.409074730008619,0,4.97663340258892,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0,0.139423744278603,0.307801034015188,0,0,0,0.217294743844016,6.69902435437031,6.59502672493409,22.9204953688013,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.04836000945218,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0.999048047910651,0,0,0.343189995723929,0,0,0.471388069233591,0,0,0.407992870545287,0,0,0,0,0,0,3.35138881526705,0.458320848023367,0,0.399358000997982,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0.157566364614447,0.0824158583811665,0.202210631562555,0,0.169346664131569,0,0.272406812223151,0,0,0,0,0,0,0.335434687599266,0.86686278029118,0.314727528809989,0,0,0,1.42939065274673,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.747511887973863,0.628817220398664,2.48543433208317,0.496166021811951,0,0,0,0,0.5013797880454,0,1.31149052283922,0,0.886068179966986,0.244052529803926,0.1251909307065,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,4.23478475456709,0,0,0.895528817321244,0,1.10961172300523,0.757612021100357,1.0062716070103,0,0.686520205190771,0.453692771289717,0.15543720058278,0.295710299979268,0.159296767163702,0,0,1.24411862352257,2.92425886013794,2.60872530905867,0.300515217994437,4.56966254602554,1.62748293281865,0,0,0,5.17524655308201,0,1.37358282073117,1.34699795506368,0,0,0,0,0,0,0,0,0.617602894321944,0,0.706756583783524,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,2.1160556621441,0.3062454773532,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0.183428598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| ||
|short_description=p16@TIMP3 | |short_description=p16@TIMP3 | ||
}} | }} |
Latest revision as of 22:44, 19 September 2015
Short description: | p16@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 426bp_to_X80791_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.79e-19 | 12 |
extraembryonic cell | 1.03e-11 | 19 |
fat cell | 3.88e-11 | 15 |
chorionic membrane mesenchymal stem cell | 5.99e-11 | 3 |
smooth muscle cell of the subclavian artery | 7.60e-10 | 5 |
omentum preadipocyte | 7.86e-10 | 3 |
smooth muscle cell of the internal thoracic artery | 2.16e-07 | 2 |
subcutaneous preadipocyte | 5.59e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.23e-16 | 14 |
membranous layer | 1.23e-16 | 14 |
chorion | 8.17e-16 | 7 |
organ component layer | 1.03e-14 | 66 |
omentum | 5.56e-12 | 6 |
peritoneum | 5.56e-12 | 6 |
abdominal cavity | 5.56e-12 | 6 |
visceral peritoneum | 5.56e-12 | 6 |
extraembryonic structure | 5.26e-11 | 24 |
egg chorion | 5.99e-11 | 3 |
cavity lining | 7.08e-11 | 12 |
serous membrane | 7.08e-11 | 12 |
thoracic segment blood vessel | 7.60e-10 | 5 |
subclavian artery | 7.60e-10 | 5 |
perirenal fat | 1.53e-07 | 2 |
internal thoracic artery | 2.16e-07 | 2 |
adipose tissue | 3.82e-07 | 14 |
placenta | 3.94e-07 | 4 |
allantois | 3.94e-07 | 4 |
trunk blood vessel | 4.98e-07 | 7 |
integument | 8.84e-07 | 46 |
integumental system | 8.84e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.84e-07 | 14 |