FFCP PHASE1:Hg19::chr6:130686856..130686885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |EntrezGene=114801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21075 | |HGNC=21075 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VY9 | |UniProt=Q86VY9 | ||
|association_with_transcript=0bp_to_ENST00000296978,uc003qca.2,uc010kfh.2_5end | |association_with_transcript=0bp_to_ENST00000296978,uc003qca.2,uc010kfh.2_5end | ||
|cluster_id=chr6:130686856..130686885,+ | |||
|coexpression_cluster_id=C714 | |coexpression_cluster_id=C714 | ||
|description=CAGE_peak_11_at_TMEM200A_5end | |description=CAGE_peak_11_at_TMEM200A_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.44e-27!180;CL:0000192!8.47e-19!42;CL:0000514!8.47e-19!42;CL:0000359!3.94e-17!32;CL:0000187!1.72e-15!54;CL:0000680!1.07e-14!57;CL:0000056!1.07e-14!57;CL:0000355!1.07e-14!57;CL:0000057!1.09e-13!75;CL:0000393!4.14e-13!60;CL:0000211!4.14e-13!60;CL:0000183!6.65e-13!59;CL:0002334!3.67e-10!12;CL:0002620!3.33e-07!23;CL:0002539!3.55e-07!10 | |ontology_enrichment_celltype=CL:0000055!3.44e-27!180;CL:0000192!8.47e-19!42;CL:0000514!8.47e-19!42;CL:0000359!3.94e-17!32;CL:0000187!1.72e-15!54;CL:0000680!1.07e-14!57;CL:0000056!1.07e-14!57;CL:0000355!1.07e-14!57;CL:0000057!1.09e-13!75;CL:0000393!4.14e-13!60;CL:0000211!4.14e-13!60;CL:0000183!6.65e-13!59;CL:0002334!3.67e-10!12;CL:0002620!3.33e-07!23;CL:0002539!3.55e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.67e-25;32!CL:0002595;3.32e-14;5!CL:0000192;1.14e-13;43!CL:0002334;6.54e-13;12!CL:0002539;9.50e-13;10!CL:0002594;3.33e-11;4!CL:1000306;7.85e-11;4!CL:0002547;7.85e-11;4!CL:0002579;3.69e-09;3 | |ontology_enrichment_celltype_v019=CL:0000359;8.67e-25;32!CL:0002595;3.32e-14;5!CL:0000192;1.14e-13;43!CL:0002334;6.54e-13;12!CL:0002539;9.50e-13;10!CL:0002594;3.33e-11;4!CL:1000306;7.85e-11;4!CL:0002547;7.85e-11;4!CL:0002579;3.69e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.81e-26,32;CL:0000192,8.09e-18,43;CL:0000514,8.09e-18,43;CL:0002595,4.65e-14,5;CL:0002334,7.14e-13,12;CL:0002539,7.35e-13,10;CL:0000187,8.22e-13,55;CL:0000680,6.84e-12,58;CL:0000056,6.84e-12,58;CL:0000355,6.84e-12,58;CL:0000393,4.59e-11,61;CL:0000211,4.59e-11,61;CL:1000306,5.18e-11,4;CL:0002547,5.18e-11,4;CL:0002594,5.46e-11,4;CL:0002579,3.39e-09,3;CL:0000723,1.16e-08,433;CL:0000048,1.89e-08,427;CL:0000034,3.04e-08,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.14e-13;43 | |ontology_enrichment_development_v019=CL:0000514;1.14e-13;43 | ||
|ontology_enrichment_disease=DOID:2394!1.49e-08!14 | |ontology_enrichment_disease=DOID:2394!1.49e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.79e-16;14!DOID:120;1.56e-07;27!DOID:193;7.03e-07;29 | |ontology_enrichment_disease_v019=DOID:2394;1.79e-16;14!DOID:120;1.56e-07;27!DOID:193;7.03e-07;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,5.96e-17,14;DOID:120,9.31e-08,27;DOID:193,4.39e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002385!3.35e-13!63;UBERON:0001015!3.35e-13!63;UBERON:0000383!3.35e-13!63;UBERON:0000914!7.50e-13!83;UBERON:0002329!7.50e-13!83;UBERON:0003077!7.50e-13!83;UBERON:0003059!7.50e-13!83;UBERON:0007282!7.50e-13!83;UBERON:0009618!7.50e-13!83;UBERON:0007285!7.50e-13!83;UBERON:0001134!9.67e-13!61;UBERON:0002036!9.67e-13!61;UBERON:0003082!9.67e-13!61;UBERON:0000486!2.81e-12!82;UBERON:0004290!3.05e-12!70;UBERON:0001637!3.73e-11!42;UBERON:0003509!3.73e-11!42;UBERON:0004572!3.73e-11!42;UBERON:0004573!5.86e-10!33;UBERON:0004571!5.86e-10!33;UBERON:0001135!2.59e-08!15;UBERON:0005256!1.63e-07!143;UBERON:0001981!2.10e-07!60;UBERON:0007500!2.10e-07!60;UBERON:0004537!2.10e-07!60;UBERON:0006965!2.10e-07!60;UBERON:0000475!2.30e-07!365;UBERON:0004237!3.55e-07!10;UBERON:0004695!3.55e-07!10;UBERON:0002111!3.55e-07!10;UBERON:0004178!3.55e-07!10 | |ontology_enrichment_uberon=UBERON:0002385!3.35e-13!63;UBERON:0001015!3.35e-13!63;UBERON:0000383!3.35e-13!63;UBERON:0000914!7.50e-13!83;UBERON:0002329!7.50e-13!83;UBERON:0003077!7.50e-13!83;UBERON:0003059!7.50e-13!83;UBERON:0007282!7.50e-13!83;UBERON:0009618!7.50e-13!83;UBERON:0007285!7.50e-13!83;UBERON:0001134!9.67e-13!61;UBERON:0002036!9.67e-13!61;UBERON:0003082!9.67e-13!61;UBERON:0000486!2.81e-12!82;UBERON:0004290!3.05e-12!70;UBERON:0001637!3.73e-11!42;UBERON:0003509!3.73e-11!42;UBERON:0004572!3.73e-11!42;UBERON:0004573!5.86e-10!33;UBERON:0004571!5.86e-10!33;UBERON:0001135!2.59e-08!15;UBERON:0005256!1.63e-07!143;UBERON:0001981!2.10e-07!60;UBERON:0007500!2.10e-07!60;UBERON:0004537!2.10e-07!60;UBERON:0006965!2.10e-07!60;UBERON:0000475!2.30e-07!365;UBERON:0004237!3.55e-07!10;UBERON:0004695!3.55e-07!10;UBERON:0002111!3.55e-07!10;UBERON:0004178!3.55e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.40e-18;33!UBERON:0004571;4.40e-18;33!UBERON:0001637;5.67e-16;42!UBERON:0003509;5.67e-16;42!UBERON:0004572;5.67e-16;42!UBERON:0003834;3.32e-14;5!UBERON:0001533;3.32e-14;5!UBERON:0003513;8.42e-14;7!UBERON:0000947;2.50e-13;21!UBERON:0010191;2.50e-13;21!UBERON:0004237;9.50e-13;10!UBERON:0004695;9.50e-13;10!UBERON:0002111;9.50e-13;10!UBERON:0004178;9.50e-13;10!UBERON:0001310;3.33e-11;4!UBERON:0003688;5.64e-11;6!UBERON:0002358;5.64e-11;6!UBERON:0003684;5.64e-11;6!UBERON:0001178;5.64e-11;6!UBERON:0007500;5.98e-11;56!UBERON:0001981;5.98e-11;56!UBERON:0004537;5.98e-11;56!UBERON:0004797;7.85e-11;4!UBERON:0000415;7.85e-11;4!UBERON:0007240;7.85e-11;4!UBERON:0005742;7.85e-11;4!UBERON:0005734;7.85e-11;4!UBERON:0004664;7.85e-11;4!UBERON:0004663;7.85e-11;4!UBERON:0000992;1.50e-08;13!UBERON:0002118;3.19e-08;5!UBERON:0001135;4.23e-08;15!UBERON:0000055;2.88e-07;65!UBERON:0004457;3.55e-07;9!UBERON:0010260;3.55e-07;9!UBERON:0000042;3.55e-07;9!UBERON:0003914;9.87e-07;74 | |ontology_enrichment_uberon_v019=UBERON:0004573;4.40e-18;33!UBERON:0004571;4.40e-18;33!UBERON:0001637;5.67e-16;42!UBERON:0003509;5.67e-16;42!UBERON:0004572;5.67e-16;42!UBERON:0003834;3.32e-14;5!UBERON:0001533;3.32e-14;5!UBERON:0003513;8.42e-14;7!UBERON:0000947;2.50e-13;21!UBERON:0010191;2.50e-13;21!UBERON:0004237;9.50e-13;10!UBERON:0004695;9.50e-13;10!UBERON:0002111;9.50e-13;10!UBERON:0004178;9.50e-13;10!UBERON:0001310;3.33e-11;4!UBERON:0003688;5.64e-11;6!UBERON:0002358;5.64e-11;6!UBERON:0003684;5.64e-11;6!UBERON:0001178;5.64e-11;6!UBERON:0007500;5.98e-11;56!UBERON:0001981;5.98e-11;56!UBERON:0004537;5.98e-11;56!UBERON:0004797;7.85e-11;4!UBERON:0000415;7.85e-11;4!UBERON:0007240;7.85e-11;4!UBERON:0005742;7.85e-11;4!UBERON:0005734;7.85e-11;4!UBERON:0004664;7.85e-11;4!UBERON:0004663;7.85e-11;4!UBERON:0000992;1.50e-08;13!UBERON:0002118;3.19e-08;5!UBERON:0001135;4.23e-08;15!UBERON:0000055;2.88e-07;65!UBERON:0004457;3.55e-07;9!UBERON:0010260;3.55e-07;9!UBERON:0000042;3.55e-07;9!UBERON:0003914;9.87e-07;74 | ||
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| ||
|short_description=p11@TMEM200A | |short_description=p11@TMEM200A | ||
}} | }} |
Latest revision as of 17:31, 24 September 2015
Short description: | p11@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000296978, uc003qca.2, uc010kfh.2_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.81e-26 | 32 |
smooth muscle cell | 8.09e-18 | 43 |
smooth muscle myoblast | 8.09e-18 | 43 |
smooth muscle cell of the subclavian artery | 4.65e-14 | 5 |
preadipocyte | 7.14e-13 | 12 |
aortic smooth muscle cell | 7.35e-13 | 10 |
muscle cell | 8.22e-13 | 55 |
muscle precursor cell | 6.84e-12 | 58 |
myoblast | 6.84e-12 | 58 |
multi-potent skeletal muscle stem cell | 6.84e-12 | 58 |
electrically responsive cell | 4.59e-11 | 61 |
electrically active cell | 4.59e-11 | 61 |
fibroblast of tunica adventitia of artery | 5.18e-11 | 4 |
fibroblast of the aortic adventitia | 5.18e-11 | 4 |
smooth muscle cell of the umbilical artery | 5.46e-11 | 4 |
omentum preadipocyte | 3.39e-09 | 3 |
somatic stem cell | 1.16e-08 | 433 |
multi fate stem cell | 1.89e-08 | 427 |
stem cell | 3.04e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.96e-17 | 14 |
female reproductive organ cancer | 9.31e-08 | 27 |
reproductive organ cancer | 4.39e-07 | 29 |