FFCP PHASE1:Hg19::chr15:41136293..41136302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6692 | |EntrezGene=6692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11246 | |HGNC=11246 | ||
|TSSclassifier=strong | |||
|UniProt=F5H877,O43278 | |UniProt=F5H877,O43278 | ||
|association_with_transcript=47bp_to_ENST00000536281,NM_003710,NM_181642,uc001zna.2,uc001znb.2_5end | |association_with_transcript=47bp_to_ENST00000536281,NM_003710,NM_181642,uc001zna.2,uc001znb.2_5end | ||
|cluster_id=chr15:41136293..41136302,+ | |||
|coexpression_cluster_id=C3485 | |coexpression_cluster_id=C3485 | ||
|description=CAGE_peak_6_at_SPINT1_5end | |description=CAGE_peak_6_at_SPINT1_5end | ||
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|ontology_enrichment_celltype=CL:0000066!6.15e-31!254;CL:0002076!7.82e-20!43;CL:0000223!5.69e-15!59;CL:1000507!3.40e-09!12;CL:1000494!3.40e-09!12;CL:0002251!7.40e-09!21;CL:0002368!5.95e-08!13;CL:1000449!9.42e-08!16;CL:0002077!6.51e-07!33 | |ontology_enrichment_celltype=CL:0000066!6.15e-31!254;CL:0002076!7.82e-20!43;CL:0000223!5.69e-15!59;CL:1000507!3.40e-09!12;CL:1000494!3.40e-09!12;CL:0002251!7.40e-09!21;CL:0002368!5.95e-08!13;CL:1000449!9.42e-08!16;CL:0002077!6.51e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.35e-17;42!CL:1000507;1.59e-17;10!CL:1000494;1.59e-17;10!CL:1000449;6.64e-14;15!CL:1000497;5.41e-12;17!CL:0002518;5.41e-12;17!CL:0002368;6.02e-10;13!CL:0000244;1.38e-09;4!CL:0000731;1.38e-09;4!CL:0002159;2.19e-09;14!CL:0002251;3.31e-09;20!CL:0002681;7.27e-09;12!CL:0002584;7.27e-09;12!CL:0002621;4.33e-08;3!CL:0002231;8.01e-08;3!CL:0000239;1.21e-07;3!CL:1000615;1.21e-07;3!CL:0002306;1.21e-07;3 | |ontology_enrichment_celltype_v019=CL:0002076;1.35e-17;42!CL:1000507;1.59e-17;10!CL:1000494;1.59e-17;10!CL:1000449;6.64e-14;15!CL:1000497;5.41e-12;17!CL:0002518;5.41e-12;17!CL:0002368;6.02e-10;13!CL:0000244;1.38e-09;4!CL:0000731;1.38e-09;4!CL:0002159;2.19e-09;14!CL:0002251;3.31e-09;20!CL:0002681;7.27e-09;12!CL:0002584;7.27e-09;12!CL:0002621;4.33e-08;3!CL:0002231;8.01e-08;3!CL:0000239;1.21e-07;3!CL:1000615;1.21e-07;3!CL:0002306;1.21e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.53e-27,253;CL:0002076,1.20e-22,42;CL:1000507,1.35e-17,10;CL:1000494,1.35e-17,10;CL:0000223,1.35e-14,58;CL:1000449,5.89e-14,15;CL:1000497,4.88e-12,17;CL:0002518,4.88e-12,17;CL:0002368,4.14e-10,13;CL:0000244,5.65e-10,4;CL:0000731,5.65e-10,4;CL:0002159,1.55e-09,14;CL:0002251,4.88e-09,20;CL:0002681,7.30e-09,12;CL:0002584,7.30e-09,12;CL:0002621,4.86e-08,3;CL:0002231,5.09e-08,3;CL:0000239,9.49e-08,3;CL:1000615,9.49e-08,3;CL:0002306,9.49e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000223;9.60e-09;58 | |ontology_enrichment_development_v019=CL:0000223;9.60e-09;58 | ||
|ontology_enrichment_disease=DOID:305!1.26e-13!106;DOID:1749!1.28e-10!14;DOID:0050687!1.58e-08!143;DOID:299!1.89e-08!25 | |ontology_enrichment_disease=DOID:305!1.26e-13!106;DOID:1749!1.28e-10!14;DOID:0050687!1.58e-08!143;DOID:299!1.89e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.53e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;2.53e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,4.13e-08,14;DOID:305,3.47e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.48e-13!169;UBERON:0000925!2.48e-13!169;UBERON:0006595!2.48e-13!169;UBERON:0006554!4.08e-11!44;UBERON:0001008!1.11e-10!45;UBERON:0000464!1.08e-09!104;UBERON:0009773!3.40e-09!12;UBERON:0001231!3.40e-09!12;UBERON:0004810!3.40e-09!12;UBERON:0001007!8.83e-09!155;UBERON:0001555!8.83e-09!155;UBERON:0007026!8.83e-09!155;UBERON:0000058!1.41e-08!26;UBERON:0005911!2.15e-08!82;UBERON:0006555!2.61e-08!17;UBERON:0005103!2.61e-08!17;UBERON:0000083!2.61e-08!17;UBERON:0009201!2.61e-08!17;UBERON:0004819!2.61e-08!17;UBERON:0006553!2.61e-08!17;UBERON:0003074!2.61e-08!17;UBERON:0003060!2.61e-08!17;UBERON:0000064!5.07e-08!219;UBERON:0000466!5.77e-08!126;UBERON:0001004!8.11e-08!72;UBERON:0004211!9.42e-08!16;UBERON:0001285!9.42e-08!16;UBERON:0007684!9.42e-08!16;UBERON:0003220!9.42e-08!16;UBERON:0004208!9.42e-08!16;UBERON:0000080!1.21e-07!18;UBERON:0002120!1.21e-07!18;UBERON:0004875!1.21e-07!18;UBERON:0005721!1.21e-07!18;UBERON:0005754!1.21e-07!18;UBERON:0007297!1.21e-07!18;UBERON:0003064!1.46e-07!37;UBERON:0000344!2.82e-07!12;UBERON:0005631!3.13e-07!14;UBERON:0000158!3.13e-07!14;UBERON:0005153!3.37e-07!37;UBERON:0000062!4.59e-07!511;UBERON:0000161!9.04e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!2.48e-13!169;UBERON:0000925!2.48e-13!169;UBERON:0006595!2.48e-13!169;UBERON:0006554!4.08e-11!44;UBERON:0001008!1.11e-10!45;UBERON:0000464!1.08e-09!104;UBERON:0009773!3.40e-09!12;UBERON:0001231!3.40e-09!12;UBERON:0004810!3.40e-09!12;UBERON:0001007!8.83e-09!155;UBERON:0001555!8.83e-09!155;UBERON:0007026!8.83e-09!155;UBERON:0000058!1.41e-08!26;UBERON:0005911!2.15e-08!82;UBERON:0006555!2.61e-08!17;UBERON:0005103!2.61e-08!17;UBERON:0000083!2.61e-08!17;UBERON:0009201!2.61e-08!17;UBERON:0004819!2.61e-08!17;UBERON:0006553!2.61e-08!17;UBERON:0003074!2.61e-08!17;UBERON:0003060!2.61e-08!17;UBERON:0000064!5.07e-08!219;UBERON:0000466!5.77e-08!126;UBERON:0001004!8.11e-08!72;UBERON:0004211!9.42e-08!16;UBERON:0001285!9.42e-08!16;UBERON:0007684!9.42e-08!16;UBERON:0003220!9.42e-08!16;UBERON:0004208!9.42e-08!16;UBERON:0000080!1.21e-07!18;UBERON:0002120!1.21e-07!18;UBERON:0004875!1.21e-07!18;UBERON:0005721!1.21e-07!18;UBERON:0005754!1.21e-07!18;UBERON:0007297!1.21e-07!18;UBERON:0003064!1.46e-07!37;UBERON:0000344!2.82e-07!12;UBERON:0005631!3.13e-07!14;UBERON:0000158!3.13e-07!14;UBERON:0005153!3.37e-07!37;UBERON:0000062!4.59e-07!511;UBERON:0000161!9.04e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.59e-17;10!UBERON:0009773;1.59e-17;10!UBERON:0001231;1.59e-17;10!UBERON:0004810;1.59e-17;10!UBERON:0006555;6.64e-14;15!UBERON:0004819;6.64e-14;15!UBERON:0001285;6.64e-14;15!UBERON:0007684;6.64e-14;15!UBERON:0006554;5.69e-12;30!UBERON:0001008;5.69e-12;30!UBERON:0001225;7.27e-09;12!UBERON:0008987;7.27e-09;12!UBERON:0000486;8.34e-09;12!UBERON:0002294;1.82e-08;7!UBERON:0001173;1.82e-08;7!UBERON:0001949;4.33e-08;3!UBERON:0002113;7.68e-08;24!UBERON:0011143;7.68e-08;24!UBERON:0000365;1.19e-07;5!UBERON:0006853;1.21e-07;3!UBERON:0007685;1.21e-07;3!UBERON:0004134;1.21e-07;3!UBERON:0001851;7.51e-07;15!UBERON:0000353;7.51e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0004211;1.59e-17;10!UBERON:0009773;1.59e-17;10!UBERON:0001231;1.59e-17;10!UBERON:0004810;1.59e-17;10!UBERON:0006555;6.64e-14;15!UBERON:0004819;6.64e-14;15!UBERON:0001285;6.64e-14;15!UBERON:0007684;6.64e-14;15!UBERON:0006554;5.69e-12;30!UBERON:0001008;5.69e-12;30!UBERON:0001225;7.27e-09;12!UBERON:0008987;7.27e-09;12!UBERON:0000486;8.34e-09;12!UBERON:0002294;1.82e-08;7!UBERON:0001173;1.82e-08;7!UBERON:0001949;4.33e-08;3!UBERON:0002113;7.68e-08;24!UBERON:0011143;7.68e-08;24!UBERON:0000365;1.19e-07;5!UBERON:0006853;1.21e-07;3!UBERON:0007685;1.21e-07;3!UBERON:0004134;1.21e-07;3!UBERON:0001851;7.51e-07;15!UBERON:0000353;7.51e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.35e-17,10;UBERON:0004211,5.89e-14,15;UBERON:0009773,5.89e-14,15;UBERON:0001231,5.89e-14,15;UBERON:0001285,5.89e-14,15;UBERON:0007684,5.89e-14,15;UBERON:0004208,5.89e-14,15;UBERON:0006555,6.16e-13,16;UBERON:0004819,6.16e-13,16;UBERON:0006554,9.82e-12,47;UBERON:0001008,2.17e-11,48;UBERON:0004119,7.33e-10,160;UBERON:0000925,7.33e-10,160;UBERON:0006595,7.33e-10,160;UBERON:0001225,7.30e-09,12;UBERON:0008987,7.30e-09,12;UBERON:0001949,4.86e-08,3;UBERON:0000365,5.88e-08,5;UBERON:0006853,9.49e-08,3;UBERON:0007685,9.49e-08,3;UBERON:0004134,9.49e-08,3;UBERON:0002113,4.23e-07,26;UBERON:0003918,4.23e-07,26;UBERON:0011143,4.23e-07,26;UBERON:0005095,4.23e-07,26;UBERON:0007687,4.23e-07,26;UBERON:0001851,7.54e-07,15;UBERON:0000353,7.54e-07,15 | |||
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| ||
|short_description=p6@SPINT1 | |short_description=p6@SPINT1 | ||
}} | }} |
Latest revision as of 13:54, 17 September 2015
Short description: | p6@SPINT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SPINT1_5end |
Coexpression cluster: | C3485_Alveolar_choriocarcinoma_Iris_placenta_Urothelial_endometrioid_clear |
Association with transcript: | 47bp_to_ENST00000536281, NM_003710, NM_181642, uc001zna.2, uc001znb.2_5end |
EntrezGene: | SPINT1 |
HGNC: | 11246 |
UniProt: | F5H877O43278 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.53e-27 | 253 |
endo-epithelial cell | 1.20e-22 | 42 |
kidney tubule cell | 1.35e-17 | 10 |
nephron tubule epithelial cell | 1.35e-17 | 10 |
endodermal cell | 1.35e-14 | 58 |
epithelial cell of nephron | 5.89e-14 | 15 |
kidney cell | 4.88e-12 | 17 |
kidney epithelial cell | 4.88e-12 | 17 |
respiratory epithelial cell | 4.14e-10 | 13 |
transitional epithelial cell | 5.65e-10 | 4 |
urothelial cell | 5.65e-10 | 4 |
general ecto-epithelial cell | 1.55e-09 | 14 |
epithelial cell of alimentary canal | 4.88e-09 | 20 |
kidney cortical cell | 7.30e-09 | 12 |
renal cortical epithelial cell | 7.30e-09 | 12 |
gingival epithelial cell | 4.86e-08 | 3 |
epithelial cell of prostate | 5.09e-08 | 3 |
brush border epithelial cell | 9.49e-08 | 3 |
kidney cortex tubule cell | 9.49e-08 | 3 |
epithelial cell of proximal tubule | 9.49e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.35e-17 | 10 |
nephron epithelium | 5.89e-14 | 15 |
renal tubule | 5.89e-14 | 15 |
nephron tubule | 5.89e-14 | 15 |
nephron | 5.89e-14 | 15 |
uriniferous tubule | 5.89e-14 | 15 |
nephrogenic mesenchyme | 5.89e-14 | 15 |
excretory tube | 6.16e-13 | 16 |
kidney epithelium | 6.16e-13 | 16 |
urinary system structure | 9.82e-12 | 47 |
renal system | 2.17e-11 | 48 |
endoderm-derived structure | 7.33e-10 | 160 |
endoderm | 7.33e-10 | 160 |
presumptive endoderm | 7.33e-10 | 160 |
cortex of kidney | 7.30e-09 | 12 |
renal parenchyma | 7.30e-09 | 12 |
gingival epithelium | 4.86e-08 | 3 |
urothelium | 5.88e-08 | 5 |
renal cortex tubule | 9.49e-08 | 3 |
region of nephron tubule | 9.49e-08 | 3 |
proximal tubule | 9.49e-08 | 3 |
kidney | 4.23e-07 | 26 |
kidney mesenchyme | 4.23e-07 | 26 |
upper urinary tract | 4.23e-07 | 26 |
kidney rudiment | 4.23e-07 | 26 |
kidney field | 4.23e-07 | 26 |
cortex | 7.54e-07 | 15 |
parenchyma | 7.54e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.13e-08 | 14 |
carcinoma | 3.47e-07 | 106 |