FFCP PHASE1:Hg19::chr1:51768799..51768815,-: Difference between revisions
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|id=chr1:51768799..51768815,-
|short_description=p10@TTC39A
|description=CAGE_peak_10_at_TTC39A_5end
|association_with_transcript=14bp_to_ENST00000524442_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22996 | |EntrezGene=22996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18657 | |HGNC=18657 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000524442_5end | |||
|cluster_id=chr1:51768799..51768815,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_10_at_TTC39A_5end | |||
|id=chr1:51768799..51768815,- | |||
|ontology_enrichment_celltype=CL:0000784!3.06e-38!3;CL:0000080!8.56e-20!6;CL:0000451!6.53e-11!10 | |||
|ontology_enrichment_celltype_v019=CL:0000784;6.19e-84;3!CL:0000451;1.28e-23;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,7.14e-84,3;CL:0000451,1.33e-23,10;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!4.00e-12!10;UBERON:0000358!4.00e-12!10;UBERON:0000307!4.00e-12!10;UBERON:0000091!4.00e-12!10;UBERON:0000087!4.00e-12!10;UBERON:0007806!4.00e-12!10;UBERON:0008780!4.00e-12!10;UBERON:0005728!4.00e-12!10;UBERON:0000178!2.92e-08!15;UBERON:0000179!2.92e-08!15;UBERON:0000463!2.92e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.91e-26;10!UBERON:0000178;8.52e-18;15!UBERON:0000179;8.52e-18;15!UBERON:0000463;8.52e-18;15!UBERON:0000478;2.07e-11;24!UBERON:0002390;8.23e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.78e-26,10;UBERON:0000358,2.78e-26,10;UBERON:0000307,2.78e-26,10;UBERON:0000091,2.78e-26,10;UBERON:0000087,2.78e-26,10;UBERON:0007010,2.78e-26,10;UBERON:0007806,2.78e-26,10;UBERON:0008780,2.78e-26,10;UBERON:0005728,2.78e-26,10;UBERON:0000178,8.28e-18,15;UBERON:0000179,8.28e-18,15;UBERON:0000463,8.28e-18,15;UBERON:0000478,2.04e-11,24 | |||
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|short_description=p10@TTC39A | |||
}} | }} |
Latest revision as of 11:38, 18 September 2015
Short description: | p10@TTC39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TTC39A_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 14bp_to_ENST00000524442_5end |
EntrezGene: | TTC39A |
HGNC: | 18657 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 7.14e-84 | 3 |
dendritic cell | 1.33e-23 | 10 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.78e-26 | 10 |
blastocyst | 2.78e-26 | 10 |
blastula | 2.78e-26 | 10 |
bilaminar disc | 2.78e-26 | 10 |
inner cell mass | 2.78e-26 | 10 |
cleaving embryo | 2.78e-26 | 10 |
connecting stalk | 2.78e-26 | 10 |
inner cell mass derived epiblast | 2.78e-26 | 10 |
extraembryonic mesoderm | 2.78e-26 | 10 |
blood | 8.28e-18 | 15 |
haemolymphatic fluid | 8.28e-18 | 15 |
organism substance | 8.28e-18 | 15 |
extraembryonic structure | 2.04e-11 | 24 |