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FFCP PHASE1:Hg19::chr22:37505588..37505607,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=164656
|EntrezGene=164656
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=16517
|HGNC=16517
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENST00000406856,uc003aqt.1_5end
|association_with_transcript=0bp_to_ENST00000406856,uc003aqt.1_5end
|cluster_id=chr22:37505588..37505607,-
|coexpression_cluster_id=C5
|coexpression_cluster_id=C5
|description=CAGE_peak_2_at_TMPRSS6_5end
|description=CAGE_peak_2_at_TMPRSS6_5end
Line 9: Line 14:
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|ontology_enrichment_celltype=CL:0000181!1.99e-21!12;CL:0000417!1.99e-21!12;CL:0000668!1.99e-21!12;CL:0000414!1.99e-21!12;CL:0000412!1.99e-21!12;CL:0000182!1.99e-21!12;CL:0002541!9.10e-11!3;CL:0000313!2.64e-08!1
|ontology_enrichment_celltype_v019=CL:0002541;6.92e-27;3!CL:0000182;1.32e-15;12!CL:0002535;3.02e-11;2
|ontology_enrichment_celltype_v019=CL:0002541;6.92e-27;3!CL:0000182;1.32e-15;12!CL:0002535;3.02e-11;2
|ontology_enrichment_celltype_v019_2=CL:0002541,6.92e-27,3;CL:0000182,1.29e-15,12;CL:0002535,3.02e-11,2
|ontology_enrichment_development_v019=UBERON:0004161;3.25e-08;11!UBERON:0009497;4.39e-07;13
|ontology_enrichment_development_v019=UBERON:0004161;3.25e-08;11!UBERON:0009497;4.39e-07;13
|ontology_enrichment_disease=DOID:2152!2.64e-08!1
|ontology_enrichment_disease=DOID:2152!2.64e-08!1
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0002107!1.29e-23!19;UBERON:0006925!1.29e-23!19;UBERON:0008836!1.29e-23!19;UBERON:0005057!2.96e-21!26;UBERON:0008835!3.02e-20!22;UBERON:0003894!3.02e-20!22;UBERON:0009854!2.56e-19!23;UBERON:0007499!1.10e-17!25;UBERON:0009497!1.10e-17!25;UBERON:0000015!1.10e-17!25;UBERON:0002423!1.10e-17!25;UBERON:0006235!1.10e-17!25;UBERON:0004161!1.10e-17!25;UBERON:0009856!5.81e-17!26;UBERON:0002365!4.79e-14!31;UBERON:0002330!4.79e-14!31;UBERON:0002368!2.59e-12!35;UBERON:0000476!9.10e-11!3;UBERON:0000920!9.10e-11!3;UBERON:0003124!8.47e-10!7;UBERON:0003929!1.38e-09!54;UBERON:0000949!2.52e-09!45;UBERON:0005172!2.60e-09!55;UBERON:0005173!2.60e-09!55;UBERON:0006122!1.37e-08!1;UBERON:0002146!2.29e-08!1;UBERON:0005623!2.29e-08!1;UBERON:0005631!2.34e-08!14;UBERON:0000158!2.34e-08!14;UBERON:0004911!2.64e-08!1;UBERON:0002417!2.94e-08!61;UBERON:0000916!2.94e-08!61;UBERON:0002530!7.61e-07!59
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|short_description=p2@TMPRSS6
|short_description=p2@TMPRSS6
}}
}}

Latest revision as of 04:05, 20 September 2015

Short description:p2@TMPRSS6
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_TMPRSS6_5end
Coexpression cluster:C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas
Association with transcript: 0bp_to_ENST00000406856, uc003aqt.1_5end
EntrezGene:TMPRSS6
HGNC: 16517
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data