FFCP PHASE1:Hg19::chr4:77870934..77870956,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55752 | |EntrezGene=55752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25589 | |HGNC=25589 | ||
|TSSclassifier=strong | |||
|UniProt=D6RER5 | |UniProt=D6RER5 | ||
|association_with_transcript=-5bp_to_ENST00000505788_5end | |association_with_transcript=-5bp_to_ENST00000505788_5end | ||
|cluster_id=chr4:77870934..77870956,+ | |||
|coexpression_cluster_id=C4425 | |coexpression_cluster_id=C4425 | ||
|description=CAGE_peak_3_at_SEPT11_5end | |description=CAGE_peak_3_at_SEPT11_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.68e-24!180;CL:0000057!5.00e-17!75;CL:0002620!1.08e-11!23;CL:0000136!6.45e-08!15 | |ontology_enrichment_celltype=CL:0000055!4.68e-24!180;CL:0000057!5.00e-17!75;CL:0002620!1.08e-11!23;CL:0000136!6.45e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.04e-11;23!CL:0000057;3.06e-07;73!CL:0000136;6.91e-07;13 | |ontology_enrichment_celltype_v019=CL:0002620;1.04e-11;23!CL:0000057;3.06e-07;73!CL:0000136;6.91e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.46e-17,76;CL:0002620,1.06e-11,23;CL:0000136,6.39e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.13e-15!365;UBERON:0001017!5.87e-15!82;UBERON:0000073!4.48e-14!94;UBERON:0001016!4.48e-14!94;UBERON:0002616!9.69e-14!59;UBERON:0004121!1.05e-13!169;UBERON:0005743!1.43e-13!86;UBERON:0000955!2.67e-13!69;UBERON:0006238!2.67e-13!69;UBERON:0000924!3.15e-13!173;UBERON:0006601!3.15e-13!173;UBERON:0001049!2.52e-12!57;UBERON:0005068!2.52e-12!57;UBERON:0006241!2.52e-12!57;UBERON:0007135!2.52e-12!57;UBERON:0003080!3.45e-12!42;UBERON:0002780!6.17e-12!41;UBERON:0001890!6.17e-12!41;UBERON:0006240!6.17e-12!41;UBERON:0000033!1.01e-11!123;UBERON:0001869!2.48e-11!32;UBERON:0001893!3.06e-11!34;UBERON:0002791!6.20e-11!33;UBERON:0002020!9.61e-11!34;UBERON:0003528!9.61e-11!34;UBERON:0003075!1.17e-10!86;UBERON:0007284!1.17e-10!86;UBERON:0003056!3.35e-10!61;UBERON:0000153!3.70e-10!129;UBERON:0007811!3.70e-10!129;UBERON:0002346!5.31e-10!90;UBERON:0002199!8.13e-10!45;UBERON:0002416!8.13e-10!45;UBERON:0000119!2.08e-09!312;UBERON:0000914!3.39e-09!83;UBERON:0002329!3.39e-09!83;UBERON:0003077!3.39e-09!83;UBERON:0003059!3.39e-09!83;UBERON:0007282!3.39e-09!83;UBERON:0009618!3.39e-09!83;UBERON:0007285!3.39e-09!83;UBERON:0002097!3.59e-09!40;UBERON:0000483!5.34e-09!309;UBERON:0000956!7.33e-09!25;UBERON:0000203!7.33e-09!25;UBERON:0003102!6.49e-08!95;UBERON:0000468!8.75e-08!659;UBERON:0002619!1.84e-07!22;UBERON:0001950!8.05e-07!20;UBERON:0000481!9.16e-07!347 | |ontology_enrichment_uberon=UBERON:0000475!1.13e-15!365;UBERON:0001017!5.87e-15!82;UBERON:0000073!4.48e-14!94;UBERON:0001016!4.48e-14!94;UBERON:0002616!9.69e-14!59;UBERON:0004121!1.05e-13!169;UBERON:0005743!1.43e-13!86;UBERON:0000955!2.67e-13!69;UBERON:0006238!2.67e-13!69;UBERON:0000924!3.15e-13!173;UBERON:0006601!3.15e-13!173;UBERON:0001049!2.52e-12!57;UBERON:0005068!2.52e-12!57;UBERON:0006241!2.52e-12!57;UBERON:0007135!2.52e-12!57;UBERON:0003080!3.45e-12!42;UBERON:0002780!6.17e-12!41;UBERON:0001890!6.17e-12!41;UBERON:0006240!6.17e-12!41;UBERON:0000033!1.01e-11!123;UBERON:0001869!2.48e-11!32;UBERON:0001893!3.06e-11!34;UBERON:0002791!6.20e-11!33;UBERON:0002020!9.61e-11!34;UBERON:0003528!9.61e-11!34;UBERON:0003075!1.17e-10!86;UBERON:0007284!1.17e-10!86;UBERON:0003056!3.35e-10!61;UBERON:0000153!3.70e-10!129;UBERON:0007811!3.70e-10!129;UBERON:0002346!5.31e-10!90;UBERON:0002199!8.13e-10!45;UBERON:0002416!8.13e-10!45;UBERON:0000119!2.08e-09!312;UBERON:0000914!3.39e-09!83;UBERON:0002329!3.39e-09!83;UBERON:0003077!3.39e-09!83;UBERON:0003059!3.39e-09!83;UBERON:0007282!3.39e-09!83;UBERON:0009618!3.39e-09!83;UBERON:0007285!3.39e-09!83;UBERON:0002097!3.59e-09!40;UBERON:0000483!5.34e-09!309;UBERON:0000956!7.33e-09!25;UBERON:0000203!7.33e-09!25;UBERON:0003102!6.49e-08!95;UBERON:0000468!8.75e-08!659;UBERON:0002619!1.84e-07!22;UBERON:0001950!8.05e-07!20;UBERON:0000481!9.16e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.37e-10;32!UBERON:0002791;2.13e-10;32!UBERON:0001893;5.03e-10;34!UBERON:0003528;6.81e-10;34!UBERON:0002020;6.81e-10;34!UBERON:0000956;5.39e-09;25!UBERON:0000203;5.39e-09;25!UBERON:0002780;7.19e-09;41!UBERON:0001890;7.19e-09;41!UBERON:0002097;1.16e-07;41!UBERON:0002619;1.42e-07;22!UBERON:0000073;2.89e-07;53!UBERON:0002616;2.89e-07;53!UBERON:0002199;5.90e-07;46!UBERON:0002416;5.90e-07;46!UBERON:0001950;6.44e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0001869;1.37e-10;32!UBERON:0002791;2.13e-10;32!UBERON:0001893;5.03e-10;34!UBERON:0003528;6.81e-10;34!UBERON:0002020;6.81e-10;34!UBERON:0000956;5.39e-09;25!UBERON:0000203;5.39e-09;25!UBERON:0002780;7.19e-09;41!UBERON:0001890;7.19e-09;41!UBERON:0002097;1.16e-07;41!UBERON:0002619;1.42e-07;22!UBERON:0000073;2.89e-07;53!UBERON:0002616;2.89e-07;53!UBERON:0002199;5.90e-07;46!UBERON:0002416;5.90e-07;46!UBERON:0001950;6.44e-07;20 | ||
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| ||
|short_description=p3@SEPT11 | |short_description=p3@SEPT11 | ||
}} | }} |
Latest revision as of 18:31, 18 September 2015
Short description: | p3@SEPT11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEPT11_5end |
Coexpression cluster: | C4425_Fibroblast_Preadipocyte_Ewing_mesodermal_Mesenchymal_Pancreatic_neurofibroma |
Association with transcript: | -5bp_to_ENST00000505788_5end |
EntrezGene: | SEPT11 |
HGNC: | 25589 |
UniProt: | D6RER5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.46e-17 | 76 |
skin fibroblast | 1.06e-11 | 23 |
fat cell | 6.39e-08 | 15 |