FFCP PHASE1:Hg19::chr11:116694104..116694108,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=337 | |EntrezGene=337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=602 | |HGNC=602 | ||
|TSSclassifier=strong | |||
|UniProt=P06727 | |UniProt=P06727 | ||
|association_with_transcript=-82bp_to_ENST00000357780_5end | |association_with_transcript=-82bp_to_ENST00000357780_5end | ||
|cluster_id=chr11:116694104..116694108,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_13_at_APOA4_5end | |description=CAGE_peak_13_at_APOA4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002231!4.09e-23!3 | |ontology_enrichment_celltype=CL:0002231!4.09e-23!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.40e-10!27;UBERON:0001155!1.12e-08!9;UBERON:0005409!1.78e-08!35;UBERON:0000059!2.47e-07!11;UBERON:0002367!2.63e-07!11;UBERON:0010147!2.63e-07!11;UBERON:0009846!2.63e-07!11;UBERON:0003353!2.63e-07!11;UBERON:0004902!2.63e-07!11;UBERON:0003820!2.63e-07!11;UBERON:0009847!2.63e-07!11;UBERON:0003937!8.38e-07!12;UBERON:0005399!8.38e-07!12 | |ontology_enrichment_uberon=UBERON:0000160!1.40e-10!27;UBERON:0001155!1.12e-08!9;UBERON:0005409!1.78e-08!35;UBERON:0000059!2.47e-07!11;UBERON:0002367!2.63e-07!11;UBERON:0010147!2.63e-07!11;UBERON:0009846!2.63e-07!11;UBERON:0003353!2.63e-07!11;UBERON:0004902!2.63e-07!11;UBERON:0003820!2.63e-07!11;UBERON:0009847!2.63e-07!11;UBERON:0003937!8.38e-07!12;UBERON:0005399!8.38e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.48e-40;4!UBERON:0001135;1.22e-14;15!UBERON:0000160;1.85e-12;17!UBERON:0005409;4.42e-10;22!UBERON:0004921;2.32e-07;33!UBERON:0002385;2.32e-07;31!UBERON:0001015;2.32e-07;31!UBERON:0000383;2.32e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0002108;1.48e-40;4!UBERON:0001135;1.22e-14;15!UBERON:0000160;1.85e-12;17!UBERON:0005409;4.42e-10;22!UBERON:0004921;2.32e-07;33!UBERON:0002385;2.32e-07;31!UBERON:0001015;2.32e-07;31!UBERON:0000383;2.32e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.48e-40,4;UBERON:0001135,1.22e-14,15;UBERON:0000160,1.85e-12,17;UBERON:0005409,4.34e-09,25 | |||
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|short_description=p13@APOA4 | |short_description=p13@APOA4 | ||
}} | }} |
Latest revision as of 19:23, 15 September 2015
Short description: | p13@APOA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_APOA4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -82bp_to_ENST00000357780_5end |
EntrezGene: | APOA4 |
HGNC: | 602 |
UniProt: | P06727 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.48e-40 | 4 |
smooth muscle tissue | 1.22e-14 | 15 |
intestine | 1.85e-12 | 17 |
gastrointestinal system | 4.34e-09 | 25 |