FFCP PHASE1:Hg19::chr4:54518619..54518649,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84708 | |EntrezGene=84708 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6657 | |HGNC=6657 | ||
|TSSclassifier=strong | |||
|UniProt=D6RE08 | |UniProt=D6RE08 | ||
|association_with_transcript=0bp_to_ENST00000504605,ENST00000507168_5end | |association_with_transcript=0bp_to_ENST00000504605,ENST00000507168_5end | ||
|cluster_id=chr4:54518619..54518649,- | |||
|coexpression_cluster_id=C1700 | |coexpression_cluster_id=C1700 | ||
|description=CAGE_peak_5_at_LNX1_5end | |description=CAGE_peak_5_at_LNX1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;5.91e-10;65!UBERON:0005062;6.13e-09;4!UBERON:0007284;6.13e-09;4!UBERON:0007297;5.12e-08;2!UBERON:0004872;1.02e-07;7!UBERON:0006965;2.05e-07;2 | |ontology_enrichment_development_v019=UBERON:0006603;5.91e-10;65!UBERON:0005062;6.13e-09;4!UBERON:0007284;6.13e-09;4!UBERON:0007297;5.12e-08;2!UBERON:0004872;1.02e-07;7!UBERON:0006965;2.05e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;3.75e-08;2 | |ontology_enrichment_disease_v019=DOID:114;3.75e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,3.95e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.38e-64!115;UBERON:0000481!3.89e-08!347;UBERON:0003978!5.33e-08!3;UBERON:0009751!5.33e-08!3;UBERON:0000946!5.33e-08!3;UBERON:0002523!5.33e-08!3;UBERON:0005983!5.33e-08!3;UBERON:0002165!5.33e-08!3;UBERON:0002062!5.33e-08!3;UBERON:0007280!5.33e-08!3;UBERON:0006947!9.46e-08!3;UBERON:0004054!9.46e-08!3;UBERON:0004151!1.01e-07!3;UBERON:0003103!3.14e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!2.38e-64!115;UBERON:0000481!3.89e-08!347;UBERON:0003978!5.33e-08!3;UBERON:0009751!5.33e-08!3;UBERON:0000946!5.33e-08!3;UBERON:0002523!5.33e-08!3;UBERON:0005983!5.33e-08!3;UBERON:0002165!5.33e-08!3;UBERON:0002062!5.33e-08!3;UBERON:0007280!5.33e-08!3;UBERON:0006947!9.46e-08!3;UBERON:0004054!9.46e-08!3;UBERON:0004151!1.01e-07!3;UBERON:0003103!3.14e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.11e-12;114!UBERON:0003978;8.46e-12;3!UBERON:0000946;8.46e-12;3!UBERON:0006947;1.77e-11;3!UBERON:0004054;1.77e-11;3!UBERON:0004151;2.72e-11;3!UBERON:0007100;9.80e-10;25!UBERON:0005904;1.06e-08;4!UBERON:0002133;1.49e-08;2!UBERON:0002081;4.02e-08;2!UBERON:0005090;7.74e-08;2!UBERON:0001630;7.74e-08;2!UBERON:0003135;9.41e-08;11 | |ontology_enrichment_uberon_v019=UBERON:0007023;1.11e-12;114!UBERON:0003978;8.46e-12;3!UBERON:0000946;8.46e-12;3!UBERON:0006947;1.77e-11;3!UBERON:0004054;1.77e-11;3!UBERON:0004151;2.72e-11;3!UBERON:0007100;9.80e-10;25!UBERON:0005904;1.06e-08;4!UBERON:0002133;1.49e-08;2!UBERON:0002081;4.02e-08;2!UBERON:0005090;7.74e-08;2!UBERON:0001630;7.74e-08;2!UBERON:0003135;9.41e-08;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.06e-47,114;UBERON:0003978,7.90e-12,3;UBERON:0009751,7.90e-12,3;UBERON:0000946,7.90e-12,3;UBERON:0002523,7.90e-12,3;UBERON:0005983,7.90e-12,3;UBERON:0002165,7.90e-12,3;UBERON:0002062,7.90e-12,3;UBERON:0007280,7.90e-12,3;UBERON:0006947,1.96e-11,3;UBERON:0004054,1.96e-11,3;UBERON:0004151,2.18e-11,3;UBERON:0003103,2.68e-10,68;UBERON:0007100,6.86e-09,27;UBERON:0005904,1.14e-08,4;UBERON:0002133,1.47e-08,2;UBERON:0002081,3.32e-08,2;UBERON:0010227,3.32e-08,2;UBERON:0005090,6.87e-08,2;UBERON:0001630,6.87e-08,2;UBERON:0003135,1.12e-07,11 | |||
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| ||
|short_description=p5@LNX1 | |short_description=p5@LNX1 | ||
}} | }} |
Latest revision as of 00:30, 18 September 2015
Short description: | p5@LNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LNX1_5end |
Coexpression cluster: | C1700_heart_adipose_mature_breast_left_smooth_vagina |
Association with transcript: | 0bp_to_ENST00000504605, ENST00000507168_5end |
EntrezGene: | LNX1 |
HGNC: | 6657 |
UniProt: | D6RE08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.06e-47 | 114 |
valve | 7.90e-12 | 3 |
cardiac mesenchyme | 7.90e-12 | 3 |
cardial valve | 7.90e-12 | 3 |
tunica intima | 7.90e-12 | 3 |
heart layer | 7.90e-12 | 3 |
endocardium | 7.90e-12 | 3 |
endocardial cushion | 7.90e-12 | 3 |
presumptive endocardium | 7.90e-12 | 3 |
male genital duct | 1.96e-11 | 3 |
internal male genitalia | 1.96e-11 | 3 |
cardiac chamber | 2.18e-11 | 3 |
compound organ | 2.68e-10 | 68 |
primary circulatory organ | 6.86e-09 | 27 |
duct of male reproductive system | 1.14e-08 | 4 |
atrioventricular valve | 1.47e-08 | 2 |
cardiac atrium | 3.32e-08 | 2 |
future cardiac atrium | 3.32e-08 | 2 |
muscle structure | 6.87e-08 | 2 |
muscle organ | 6.87e-08 | 2 |
male reproductive organ | 1.12e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.95e-08 | 2 |