FFCP PHASE1:Hg19::chr15:22550947..22550971,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:22550947..22550971,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_at_chr15:22550947..22550971,+ | |description=CAGE_peak_at_chr15:22550947..22550971,+ | ||
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|ontology_enrichment_celltype=CL:0000791!2.42e-20!18;CL:0000789!2.42e-20!18;CL:0002420!2.42e-20!18;CL:0002419!2.42e-20!18;CL:0000790!2.42e-20!18;CL:0000624!1.51e-16!6;CL:0000084!4.44e-14!25;CL:0000827!4.44e-14!25;CL:0000898!4.83e-13!3;CL:0000875!1.03e-12!3;CL:0002396!1.03e-12!3;CL:0000815!1.47e-09!2;CL:0000792!1.47e-09!2;CL:0002677!1.47e-09!2;CL:0000893!1.28e-08!2;CL:0002489!1.28e-08!2;CL:0000809!1.28e-08!2;CL:0000808!1.28e-08!2;CL:0000894!1.28e-08!2;CL:0000806!1.28e-08!2;CL:0000807!1.28e-08!2;CL:0000805!1.28e-08!2;CL:0002425!1.28e-08!2;CL:0000838!1.75e-08!52;CL:0000542!2.82e-08!53;CL:0000051!2.82e-08!53 | |ontology_enrichment_celltype=CL:0000791!2.42e-20!18;CL:0000789!2.42e-20!18;CL:0002420!2.42e-20!18;CL:0002419!2.42e-20!18;CL:0000790!2.42e-20!18;CL:0000624!1.51e-16!6;CL:0000084!4.44e-14!25;CL:0000827!4.44e-14!25;CL:0000898!4.83e-13!3;CL:0000875!1.03e-12!3;CL:0002396!1.03e-12!3;CL:0000815!1.47e-09!2;CL:0000792!1.47e-09!2;CL:0002677!1.47e-09!2;CL:0000893!1.28e-08!2;CL:0002489!1.28e-08!2;CL:0000809!1.28e-08!2;CL:0000808!1.28e-08!2;CL:0000894!1.28e-08!2;CL:0000806!1.28e-08!2;CL:0000807!1.28e-08!2;CL:0000805!1.28e-08!2;CL:0002425!1.28e-08!2;CL:0000838!1.75e-08!52;CL:0000542!2.82e-08!53;CL:0000051!2.82e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000815;1.40e-27;2!CL:0000792;1.40e-27;2!CL:0002677;1.40e-27;2!CL:0000898;9.50e-19;3!CL:0000624;7.42e-10;6!CL:0000791;3.46e-07;18!CL:0000789;3.46e-07;18!CL:0002419;3.46e-07;18 | |ontology_enrichment_celltype_v019=CL:0000815;1.40e-27;2!CL:0000792;1.40e-27;2!CL:0002677;1.40e-27;2!CL:0000898;9.50e-19;3!CL:0000624;7.42e-10;6!CL:0000791;3.46e-07;18!CL:0000789;3.46e-07;18!CL:0002419;3.46e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.40e-27,2;CL:0000792,1.40e-27,2;CL:0002677,1.40e-27,2;CL:0000898,9.50e-19,3;CL:0000624,7.42e-10,6;CL:0000791,3.39e-07,18;CL:0000789,3.39e-07,18;CL:0002420,3.39e-07,18;CL:0002419,3.39e-07,18;CL:0000790,3.39e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;3.46e-07;18 | |ontology_enrichment_development_v019=CL:0000790;3.46e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;2.75e-14;1!DOID:3149;2.75e-14;1!DOID:3451;8.60e-08;2!DOID:4159;8.60e-08;2!DOID:0060122;8.60e-08;2 | |ontology_enrichment_disease_v019=DOID:3151;2.75e-14;1!DOID:3149;2.75e-14;1!DOID:3451;8.60e-08;2!DOID:4159;8.60e-08;2!DOID:0060122;8.60e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,3.15e-14,1;DOID:3149,3.15e-14,1;DOID:3451,9.19e-08,2;DOID:4159,9.19e-08,2;DOID:0060122,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002370!5.88e-09!4;UBERON:0005058!5.88e-09!4;UBERON:0009113!5.88e-09!4;UBERON:0003295!5.88e-09!4;UBERON:0005562!5.88e-09!4;UBERON:0004177!1.26e-08!7 | |ontology_enrichment_uberon=UBERON:0002370!5.88e-09!4;UBERON:0005058!5.88e-09!4;UBERON:0009113!5.88e-09!4;UBERON:0003295!5.88e-09!4;UBERON:0005562!5.88e-09!4;UBERON:0004177!1.26e-08!7 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr15:22550947..22550971,+ | |short_description=p@chr15:22550947..22550971,+ | ||
}} | }} |
Latest revision as of 00:22, 25 July 2015
Short description: | p@chr15:22550947..22550971, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:22550947..22550971, + |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.40e-27 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.40e-27 | 2 |
naive regulatory T cell | 1.40e-27 | 2 |
naive T cell | 9.50e-19 | 3 |
CD4-positive, alpha-beta T cell | 7.42e-10 | 6 |
mature alpha-beta T cell | 3.39e-07 | 18 |
alpha-beta T cell | 3.39e-07 | 18 |
immature T cell | 3.39e-07 | 18 |
mature T cell | 3.39e-07 | 18 |
immature alpha-beta T cell | 3.39e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.15e-14 | 1 |
keratoacanthoma | 3.15e-14 | 1 |
skin carcinoma | 9.19e-08 | 2 |
skin cancer | 9.19e-08 | 2 |
integumentary system cancer | 9.19e-08 | 2 |