FFCP PHASE1:Hg19::chr10:88729200..88729221,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79812 | |EntrezGene=79812 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19888 | |HGNC=19888 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000474994_5end | |association_with_transcript=16bp_to_ENST00000474994_5end | ||
|cluster_id=chr10:88729200..88729221,- | |||
|description=CAGE_peak_4_at_MMRN2_5end | |description=CAGE_peak_4_at_MMRN2_5end | ||
|id=chr10:88729200..88729221,- | |id=chr10:88729200..88729221,- | ||
|ontology_enrichment_celltype=CL:0000076!6.24e-07!62;CL:0002620!7.93e-07!23 | |ontology_enrichment_celltype=CL:0000076!6.24e-07!62;CL:0002620!7.93e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000240;2.46e-12;6!CL:0000311;2.46e-12;6!CL:0000079;2.46e-12;6!CL:0000237;2.46e-12;6!CL:0002327;1.15e-11;4!CL:0000575;9.46e-11;2!CL:0000312;8.36e-09;5!CL:0002159;3.73e-08;14!CL:0002582;7.34e-07;3 | |ontology_enrichment_celltype_v019=CL:0000240;2.46e-12;6!CL:0000311;2.46e-12;6!CL:0000079;2.46e-12;6!CL:0000237;2.46e-12;6!CL:0002327;1.15e-11;4!CL:0000575;9.46e-11;2!CL:0000312;8.36e-09;5!CL:0002159;3.73e-08;14!CL:0002582;7.34e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000240,1.91e-12,6;CL:0000311,1.91e-12,6;CL:0000079,1.91e-12,6;CL:0000237,1.91e-12,6;CL:0000036,1.91e-12,6;CL:0000357,1.91e-12,6;CL:0000114,1.91e-12,6;CL:0002327,1.08e-11,4;CL:0000575,9.55e-11,2;CL:0000076,1.62e-09,63;CL:0000312,1.03e-08,5;CL:0002159,4.21e-08,14;CL:0002077,2.11e-07,34;CL:0002582,7.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;2.46e-12;6!CL:0000114;2.46e-12;6 | |ontology_enrichment_development_v019=CL:0000357;2.46e-12;6!CL:0000114;2.46e-12;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;9.66e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;9.66e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,7.15e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.67e-13!95;UBERON:0002199!1.18e-07!45;UBERON:0002416!1.18e-07!45 | |ontology_enrichment_uberon=UBERON:0003102!6.67e-13!95;UBERON:0002199!1.18e-07!45;UBERON:0002416!1.18e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.15e-11;4 | |ontology_enrichment_uberon_v019=UBERON:0001911;1.15e-11;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.08e-11,4;UBERON:0005333,1.08e-11,4;UBERON:0008425,1.08e-11,4;UBERON:0005311,1.08e-11,4 | |||
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| ||
|short_description=p4@MMRN2 | |short_description=p4@MMRN2 | ||
}} | }} |
Latest revision as of 18:20, 19 September 2015
Short description: | p4@MMRN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MMRN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000474994_5end |
EntrezGene: | MMRN2 |
HGNC: | 19888 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelial cell | 1.91e-12 | 6 |
keratin accumulating cell | 1.91e-12 | 6 |
stratified epithelial cell | 1.91e-12 | 6 |
keratinizing barrier epithelial cell | 1.91e-12 | 6 |
epithelial fate stem cell | 1.91e-12 | 6 |
stratified epithelial stem cell | 1.91e-12 | 6 |
surface ectodermal cell | 1.91e-12 | 6 |
mammary gland epithelial cell | 1.08e-11 | 4 |
corneal epithelial cell | 9.55e-11 | 2 |
squamous epithelial cell | 1.62e-09 | 63 |
keratinocyte | 1.03e-08 | 5 |
general ecto-epithelial cell | 4.21e-08 | 14 |
ecto-epithelial cell | 2.11e-07 | 34 |
visceral preadipocyte | 7.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.08e-11 | 4 |
mammary bud | 1.08e-11 | 4 |
mammary ridge | 1.08e-11 | 4 |
mammary placode | 1.08e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.15e-08 | 14 |