FFCP PHASE1:Hg19::chr8:102987581..102987599,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83988 | |EntrezGene=83988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7655 | |HGNC=7655 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIZ1 | |UniProt=E5RIZ1 | ||
|association_with_transcript=-24bp_to_ENST00000520690_5end | |association_with_transcript=-24bp_to_ENST00000520690_5end | ||
|cluster_id=chr8:102987581..102987599,- | |||
|coexpression_cluster_id=C1120 | |coexpression_cluster_id=C1120 | ||
|description=CAGE_peak_5_at_NCALD_5end | |description=CAGE_peak_5_at_NCALD_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.50e-19!24;CL:0000826!1.50e-19!24;CL:0000838!4.97e-14!52;CL:0000542!1.03e-13!53;CL:0000051!1.03e-13!53 | |ontology_enrichment_celltype=CL:0000945!1.50e-19!24;CL:0000826!1.50e-19!24;CL:0000838!4.97e-14!52;CL:0000542!1.03e-13!53;CL:0000051!1.03e-13!53 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.21e-30;24!CL:0000542;4.85e-18;53!CL:0000946;1.31e-16;1!CL:0000786;1.31e-16;1 | |ontology_enrichment_celltype_v019=CL:0000945;1.21e-30;24!CL:0000542;4.85e-18;53!CL:0000946;1.31e-16;1!CL:0000786;1.31e-16;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.13e-30,24;CL:0000826,1.13e-30,24;CL:0000838,1.41e-28,52;CL:0000542,5.04e-28,53;CL:0000051,5.04e-28,53;CL:0000946,1.21e-16,1;CL:0000786,1.21e-16,1;CL:0000980,1.21e-16,1;CL:0002087,2.47e-12,115;CL:0002031,8.76e-12,120;CL:0000738,2.71e-10,136;CL:0000785,5.49e-09,2;CL:0000955,5.49e-09,2;CL:0000818,5.49e-09,2;CL:0000954,5.49e-09,2;CL:0000816,5.49e-09,2;CL:0002032,1.51e-08,161;CL:0000837,1.51e-08,161;CL:0000037,3.77e-08,168;CL:0000988,1.10e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.85e-18;53!CL:0000954;5.71e-09;2 | |ontology_enrichment_development_v019=CL:0000051;4.85e-18;53!CL:0000954;5.71e-09;2 | ||
|ontology_enrichment_disease=DOID:0060058!3.48e-24!10 | |ontology_enrichment_disease=DOID:0060058!3.48e-24!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;8.43e-25;10!DOID:0060060;9.58e-17;1!DOID:0060061;9.58e-17;1!DOID:8691;9.58e-17;1 | |ontology_enrichment_disease_v019=DOID:0060058;8.43e-25;10!DOID:0060060;9.58e-17;1!DOID:0060061;9.58e-17;1!DOID:8691;9.58e-17;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.69e-25,10;DOID:0060060,8.86e-17,1;DOID:0060061,8.86e-17,1;DOID:8691,8.86e-17,1;DOID:2531,1.44e-07,51;DOID:0060083,1.44e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001042!5.55e-08!10;UBERON:0009145!5.55e-08!10;UBERON:0006562!2.91e-07!11;UBERON:0004177!9.50e-07!7 | |ontology_enrichment_uberon=UBERON:0001042!5.55e-08!10;UBERON:0009145!5.55e-08!10;UBERON:0006562!2.91e-07!11;UBERON:0004177!9.50e-07!7 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p5@NCALD | |short_description=p5@NCALD | ||
}} | }} |
Latest revision as of 21:48, 24 September 2015
Short description: | p5@NCALD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NCALD_5end |
Coexpression cluster: | C1120_adult_hairy_mycosis_B_plasma_CD4_cord |
Association with transcript: | -24bp_to_ENST00000520690_5end |
EntrezGene: | NCALD |
HGNC: | 7655 |
UniProt: | E5RIZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.13e-30 | 24 |
pro-B cell | 1.13e-30 | 24 |
lymphoid lineage restricted progenitor cell | 1.41e-28 | 52 |
lymphocyte | 5.04e-28 | 53 |
common lymphoid progenitor | 5.04e-28 | 53 |
antibody secreting cell | 1.21e-16 | 1 |
plasma cell | 1.21e-16 | 1 |
plasmablast | 1.21e-16 | 1 |
nongranular leukocyte | 2.47e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 8.76e-12 | 120 |
leukocyte | 2.71e-10 | 136 |
mature B cell | 5.49e-09 | 2 |
pre-B-II cell | 5.49e-09 | 2 |
transitional stage B cell | 5.49e-09 | 2 |
small pre-B-II cell | 5.49e-09 | 2 |
immature B cell | 5.49e-09 | 2 |
hematopoietic oligopotent progenitor cell | 1.51e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-08 | 161 |
hematopoietic stem cell | 3.77e-08 | 168 |
hematopoietic cell | 1.10e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.69e-25 | 10 |
non-Hodgkin lymphoma | 8.86e-17 | 1 |
cutaneous T cell lymphoma | 8.86e-17 | 1 |
mycosis fungoides | 8.86e-17 | 1 |
hematologic cancer | 1.44e-07 | 51 |
immune system cancer | 1.44e-07 | 51 |