FFCP PHASE1:Hg19::chrX:153668432..153668446,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2664 | |EntrezGene=2664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4226 | |HGNC=4226 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=92bp_to_ENST00000489589_5end | |association_with_transcript=92bp_to_ENST00000489589_5end | ||
|cluster_id=chrX:153668432..153668446,+ | |||
|description=CAGE_peak_22_at_GDI1_5end | |description=CAGE_peak_22_at_GDI1_5end | ||
|id=chrX:153668432..153668446,+ | |id=chrX:153668432..153668446,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;5.03e-08;1 | |ontology_enrichment_celltype_v019=CL:0002591;5.03e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,8.69e-08,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;5.03e-08;1 | |ontology_enrichment_disease_v019=DOID:3112;5.03e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,7.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.50e-18!57;UBERON:0005068!6.50e-18!57;UBERON:0006241!6.50e-18!57;UBERON:0007135!6.50e-18!57;UBERON:0001869!1.33e-16!32;UBERON:0001893!5.09e-16!34;UBERON:0005743!7.89e-16!86;UBERON:0002020!8.44e-16!34;UBERON:0003528!8.44e-16!34;UBERON:0002791!1.31e-15!33;UBERON:0001017!1.82e-15!82;UBERON:0002780!2.46e-15!41;UBERON:0001890!2.46e-15!41;UBERON:0006240!2.46e-15!41;UBERON:0000073!3.19e-15!94;UBERON:0001016!3.19e-15!94;UBERON:0003080!1.26e-14!42;UBERON:0003075!1.29e-14!86;UBERON:0007284!1.29e-14!86;UBERON:0002346!1.27e-13!90;UBERON:0002616!2.32e-13!59;UBERON:0002619!3.04e-13!22;UBERON:0000956!9.27e-13!25;UBERON:0000203!9.27e-13!25;UBERON:0000955!1.24e-12!69;UBERON:0006238!1.24e-12!69;UBERON:0001950!7.76e-12!20;UBERON:0003056!1.30e-11!61;UBERON:0000033!4.35e-09!123;UBERON:0004121!6.28e-09!169;UBERON:0000924!1.61e-08!173;UBERON:0006601!1.61e-08!173;UBERON:0000153!2.51e-08!129;UBERON:0007811!2.51e-08!129;UBERON:0007023!2.30e-07!115;UBERON:0000475!7.74e-07!365;UBERON:0000025!9.45e-07!194 | |ontology_enrichment_uberon=UBERON:0001049!6.50e-18!57;UBERON:0005068!6.50e-18!57;UBERON:0006241!6.50e-18!57;UBERON:0007135!6.50e-18!57;UBERON:0001869!1.33e-16!32;UBERON:0001893!5.09e-16!34;UBERON:0005743!7.89e-16!86;UBERON:0002020!8.44e-16!34;UBERON:0003528!8.44e-16!34;UBERON:0002791!1.31e-15!33;UBERON:0001017!1.82e-15!82;UBERON:0002780!2.46e-15!41;UBERON:0001890!2.46e-15!41;UBERON:0006240!2.46e-15!41;UBERON:0000073!3.19e-15!94;UBERON:0001016!3.19e-15!94;UBERON:0003080!1.26e-14!42;UBERON:0003075!1.29e-14!86;UBERON:0007284!1.29e-14!86;UBERON:0002346!1.27e-13!90;UBERON:0002616!2.32e-13!59;UBERON:0002619!3.04e-13!22;UBERON:0000956!9.27e-13!25;UBERON:0000203!9.27e-13!25;UBERON:0000955!1.24e-12!69;UBERON:0006238!1.24e-12!69;UBERON:0001950!7.76e-12!20;UBERON:0003056!1.30e-11!61;UBERON:0000033!4.35e-09!123;UBERON:0004121!6.28e-09!169;UBERON:0000924!1.61e-08!173;UBERON:0006601!1.61e-08!173;UBERON:0000153!2.51e-08!129;UBERON:0007811!2.51e-08!129;UBERON:0007023!2.30e-07!115;UBERON:0000475!7.74e-07!365;UBERON:0000025!9.45e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.32e-27;22!UBERON:0001950;1.23e-24;20!UBERON:0000956;3.16e-24;25!UBERON:0000203;3.16e-24;25!UBERON:0001871;4.97e-24;6!UBERON:0001869;1.08e-17;32!UBERON:0001893;5.86e-17;34!UBERON:0002791;6.01e-17;32!UBERON:0003528;5.76e-16;34!UBERON:0002020;5.76e-16;34!UBERON:0002771;7.86e-15;2!UBERON:0001876;2.34e-14;2!UBERON:0000349;1.28e-12;5!UBERON:0002780;5.51e-11;41!UBERON:0001890;5.51e-11;41 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.32e-27;22!UBERON:0001950;1.23e-24;20!UBERON:0000956;3.16e-24;25!UBERON:0000203;3.16e-24;25!UBERON:0001871;4.97e-24;6!UBERON:0001869;1.08e-17;32!UBERON:0001893;5.86e-17;34!UBERON:0002791;6.01e-17;32!UBERON:0003528;5.76e-16;34!UBERON:0002020;5.76e-16;34!UBERON:0002771;7.86e-15;2!UBERON:0001876;2.34e-14;2!UBERON:0000349;1.28e-12;5!UBERON:0002780;5.51e-11;41!UBERON:0001890;5.51e-11;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,6.08e-28,22;UBERON:0001950,7.58e-25,20;UBERON:0001871,1.51e-24,6;UBERON:0000956,1.60e-24,25;UBERON:0000203,1.60e-24,25;UBERON:0002791,5.85e-19,32;UBERON:0001869,5.85e-19,32;UBERON:0003528,8.89e-18,34;UBERON:0002020,8.89e-18,34;UBERON:0001893,8.89e-18,34;UBERON:0001876,6.91e-15,2;UBERON:0002771,7.93e-15,2;UBERON:0002780,1.58e-14,41;UBERON:0001890,1.58e-14,41;UBERON:0003080,1.58e-14,41;UBERON:0006240,1.58e-14,41;UBERON:0000349,4.19e-13,5;UBERON:0001049,1.70e-12,56;UBERON:0005068,1.70e-12,56;UBERON:0006241,1.70e-12,56;UBERON:0007135,1.70e-12,56;UBERON:0000073,6.45e-11,53;UBERON:0002616,6.45e-11,53;UBERON:0001017,1.31e-09,81;UBERON:0003075,1.56e-09,82;UBERON:0007284,1.56e-09,82;UBERON:0003056,2.74e-09,61;UBERON:0002346,5.42e-09,86;UBERON:0001016,1.88e-08,89;UBERON:0000955,4.94e-08,68;UBERON:0006238,4.94e-08,68;UBERON:0000025,9.80e-08,192;UBERON:0010314,2.92e-07,132;UBERON:0010371,4.46e-07,104 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0,1.46062018077475,0.487932798790507,0.369363174230364,0.204000691244253,0,0,0.410623275218653,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0.154934401160603,0,0,0,0,0,0,0.32389366601898,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0.512321413058201,0,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.870627715885752,1.13477044938228,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0,0,0.24666754841716,0,0.404132016209064,0.490385709340376,0,0,0.468642863667593,0,0,0,0.117434498643765,0,0.421352420106746,0,0,0,0,0.741800787835671,0,0,0,0.625592599359821,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0.292311015483596,0,0,0.323292113637624,0,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0,0,0,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0,0,0,0.492663237895943,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0.763976851116555,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0.61642896765115,0.179060963239896,0,0,0,0,0.508189248444927,0,0.773288812777695,0.837581326671744,1.91381625495949,0,0,0,0.24538298343828,1.00034104211935,0,0.207970861530807,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0.783204629850962,0.343143423810856,0,0,0.106727557803444,0,1.66435439510497,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0.241718899183244,0,0.0920809889358963,0.114814448164607,0.364182336013434,0,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0.247528499761764,0,0,0,0,0.308097234229289,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.255225424989168,0.2023155617111,0.464845549297286,0.62962469366128,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0,0.202182481573316,1.58510321173008,0,0,0,0,0.136499911407986,0.282810863907425,1.13008116620243,0,1.32687795048244,0.438450885253763,0.578775534266688,0,0.608731130888112,0,1.12678241012897,0,0,0,0,0.211107635297664,0,0.379473173765715,0.699869440489966,0.0962221127255121,0,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0.0711418433484141,0,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0.111443384277478,0,0,0.296964680832639,0,1.9882952955326,1.54736358051564,0,0,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0.123084805461069,0.311039587661807,0.179736702294654,0,0,0.197286811273867,0,0,0.969332746095218,0.74214478529481,0,0,0.174919999992391,0,0,0.508507300585533,0,0.344743373241465,0,0.520874984799877,0.885741385813839,0.241192877250816,0,0.995213339381022,0.886642856860642,0.658156191461918,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0.183195186803725,0.533034776018635,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0.269604531922708,0,0.234264445725339,0.91227394607833,0,0,0,0,0.30607276163049,0,0.300646838828985,0.103688191397247,0,0.330991955875499,0,0,0,0,0.347119476670262,0,0.174118413160805,0.17472666824203,0,0.0967563312890851,0.292357268344742,0,0,0,0,0.137041924646751,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0.144090417154106,0.114536596165916,0.171594997861965,0.288109595976299,0,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0.547621515567972,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,1.59045937961861,0.5448136244463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| ||
|short_description=p22@GDI1 | |short_description=p22@GDI1 | ||
}} | }} |
Latest revision as of 03:25, 20 September 2015
Short description: | p22@GDI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_GDI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 92bp_to_ENST00000489589_5end |
EntrezGene: | GDI1 |
HGNC: | 4226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 8.69e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 6.08e-28 | 22 |
neocortex | 7.58e-25 | 20 |
temporal lobe | 1.51e-24 | 6 |
cerebral cortex | 1.60e-24 | 25 |
pallium | 1.60e-24 | 25 |
regional part of telencephalon | 5.85e-19 | 32 |
cerebral hemisphere | 5.85e-19 | 32 |
brain grey matter | 8.89e-18 | 34 |
gray matter | 8.89e-18 | 34 |
telencephalon | 8.89e-18 | 34 |
amygdala | 6.91e-15 | 2 |
middle temporal gyrus | 7.93e-15 | 2 |
regional part of forebrain | 1.58e-14 | 41 |
forebrain | 1.58e-14 | 41 |
anterior neural tube | 1.58e-14 | 41 |
future forebrain | 1.58e-14 | 41 |
limbic system | 4.19e-13 | 5 |
neural tube | 1.70e-12 | 56 |
neural rod | 1.70e-12 | 56 |
future spinal cord | 1.70e-12 | 56 |
neural keel | 1.70e-12 | 56 |
regional part of nervous system | 6.45e-11 | 53 |
regional part of brain | 6.45e-11 | 53 |
central nervous system | 1.31e-09 | 81 |
neural plate | 1.56e-09 | 82 |
presumptive neural plate | 1.56e-09 | 82 |
pre-chordal neural plate | 2.74e-09 | 61 |
neurectoderm | 5.42e-09 | 86 |
nervous system | 1.88e-08 | 89 |
brain | 4.94e-08 | 68 |
future brain | 4.94e-08 | 68 |
tube | 9.80e-08 | 192 |
structure with developmental contribution from neural crest | 2.92e-07 | 132 |
ecto-epithelium | 4.46e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 7.10e-08 | 1 |