FFCP PHASE1:Hg19::chr13:33760131..33760177,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90627 | |EntrezGene=90627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19164 | |HGNC=19164 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3M8 | |UniProt=Q9Y3M8 | ||
|association_with_transcript=38bp_to_ENST00000255486,ENST00000399364,NM_001243466,NM_178007,uc001uuu.2_5end | |association_with_transcript=38bp_to_ENST00000255486,ENST00000399364,NM_001243466,NM_178007,uc001uuu.2_5end | ||
|cluster_id=chr13:33760131..33760177,- | |||
|coexpression_cluster_id=C63 | |coexpression_cluster_id=C63 | ||
|description=CAGE_peak_13_at_STARD13_5end | |description=CAGE_peak_13_at_STARD13_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002590!6.99e-09!3;CL:0000708!1.69e-08!3 | |ontology_enrichment_celltype=CL:0002590!6.99e-09!3;CL:0000708!1.69e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002549;5.15e-21;2!CL:0002540;6.55e-08;6!CL:0000138;6.55e-08;6 | |ontology_enrichment_celltype_v019=CL:0002549;5.15e-21;2!CL:0002540;6.55e-08;6!CL:0000138;6.55e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002549,5.70e-21,2;CL:0002540,6.34e-08,6;CL:0000058,7.25e-08,6;CL:0000138,7.25e-08,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.81e-40;1!DOID:4549;1.81e-40;1!DOID:5861;1.81e-40;1!DOID:6496;1.81e-40;1!DOID:201;6.55e-08;6!DOID:0060100;6.55e-08;6 | |ontology_enrichment_disease_v019=DOID:3371;1.81e-40;1!DOID:4549;1.81e-40;1!DOID:5861;1.81e-40;1!DOID:6496;1.81e-40;1!DOID:201;6.55e-08;6!DOID:0060100;6.55e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,3.30e-40,1;DOID:4549,3.30e-40,1;DOID:5861,3.30e-40,1;DOID:6496,3.30e-40,1;DOID:201,7.25e-08,6;DOID:0060100,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0005284!3.49e-09!5;UBERON:0003210!1.69e-08!3 | |ontology_enrichment_uberon=UBERON:0005284!3.49e-09!5;UBERON:0003210!1.69e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;5.15e-21;2!UBERON:0005358;5.15e-21;2!UBERON:0001886;5.15e-21;2!UBERON:0004086;5.15e-21;2!UBERON:0005282;5.15e-21;2!UBERON:0005281;5.15e-21;2!UBERON:0002418;1.71e-14;3!UBERON:0004755;1.71e-14;3!UBERON:0002346;2.53e-11;4!UBERON:0000923;2.53e-11;4!UBERON:0010316;2.53e-11;4!UBERON:0005291;2.53e-11;4!UBERON:0001474;8.11e-10;18!UBERON:0002050;2.53e-09;5!UBERON:0005423;2.53e-09;5!UBERON:0005284;3.10e-09;5!UBERON:0004765;4.28e-07;26 | |ontology_enrichment_uberon_v019=UBERON:0005629;5.15e-21;2!UBERON:0005358;5.15e-21;2!UBERON:0001886;5.15e-21;2!UBERON:0004086;5.15e-21;2!UBERON:0005282;5.15e-21;2!UBERON:0005281;5.15e-21;2!UBERON:0002418;1.71e-14;3!UBERON:0004755;1.71e-14;3!UBERON:0002346;2.53e-11;4!UBERON:0000923;2.53e-11;4!UBERON:0010316;2.53e-11;4!UBERON:0005291;2.53e-11;4!UBERON:0001474;8.11e-10;18!UBERON:0002050;2.53e-09;5!UBERON:0005423;2.53e-09;5!UBERON:0005284;3.10e-09;5!UBERON:0004765;4.28e-07;26 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,5.70e-21,2;UBERON:0005358,5.70e-21,2;UBERON:0001886,5.70e-21,2;UBERON:0004086,5.70e-21,2;UBERON:0005282,5.70e-21,2;UBERON:0005281,5.70e-21,2;UBERON:0002418,2.09e-14,3;UBERON:0004755,2.09e-14,3;UBERON:0005284,3.22e-09,5 | |||
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| ||
|short_description=p13@STARD13 | |short_description=p13@STARD13 | ||
}} | }} |
Latest revision as of 04:23, 17 September 2015
Short description: | p13@STARD13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_STARD13_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 38bp_to_ENST00000255486, ENST00000399364, NM_001243466, NM_178007, uc001uuu.2_5end |
EntrezGene: | STARD13 |
HGNC: | 19164 |
UniProt: | Q9Y3M8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 5.70e-21 | 2 |
mesenchymal stem cell of the bone marrow | 6.34e-08 | 6 |
chondroblast | 7.25e-08 | 6 |
chondrocyte | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 5.70e-21 | 2 |
ventricle of nervous system | 5.70e-21 | 2 |
choroid plexus | 5.70e-21 | 2 |
brain ventricle | 5.70e-21 | 2 |
ventricular system of brain | 5.70e-21 | 2 |
ventricular system of central nervous system | 5.70e-21 | 2 |
cartilage tissue | 2.09e-14 | 3 |
skeletal tissue | 2.09e-14 | 3 |
brain vasculature | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.30e-40 | 1 |
extraosseous chondrosarcoma | 3.30e-40 | 1 |
myxoid chondrosarcoma | 3.30e-40 | 1 |
extraskeletal myxoid chondrosarcoma | 3.30e-40 | 1 |
connective tissue cancer | 7.25e-08 | 6 |
musculoskeletal system cancer | 7.25e-08 | 6 |