FFCP PHASE1:Hg19::chr1:70033632..70033637,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:70033632..70033637,+
|short_description=p17@LRRC7
|description=CAGE_peak_17_at_LRRC7_5end
|association_with_transcript=-443bp_to_ENST00000310961_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57554 | |EntrezGene=57554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18531 | |HGNC=18531 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-443bp_to_ENST00000310961_5end | |||
|cluster_id=chr1:70033632..70033637,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_17_at_LRRC7_5end | |||
|id=chr1:70033632..70033637,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;6.05e-13;1!CL:0000164;6.05e-13;1!CL:0000502;6.05e-13;1!CL:0000172;6.05e-13;1!CL:0000173;6.05e-13;1!CL:0000540;1.12e-08;6!CL:0000404;1.12e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,7.68e-13,1;CL:0000164,7.68e-13,1;CL:0000502,7.68e-13,1;CL:0000172,7.68e-13,1;CL:0000173,7.68e-13,1;CL:0002351,7.68e-13,1;CL:0000540,9.27e-09,6;CL:0000031,9.27e-09,6;CL:0000404,9.27e-09,6;CL:0000047,8.85e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.67e-25;2!CL:0002351;6.05e-13;1!CL:0000031;1.12e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;6.05e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,7.68e-13,1 | |||
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| ||
|short_description=p17@LRRC7 | |||
}} | }} |
Latest revision as of 03:32, 19 September 2015
Short description: | p17@LRRC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -443bp_to_ENST00000310961_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.68e-13 | 1 |
enteroendocrine cell | 7.68e-13 | 1 |
type D enteroendocrine cell | 7.68e-13 | 1 |
somatostatin secreting cell | 7.68e-13 | 1 |
pancreatic D cell | 7.68e-13 | 1 |
progenitor cell of endocrine pancreas | 7.68e-13 | 1 |
neuron | 9.27e-09 | 6 |
neuroblast | 9.27e-09 | 6 |
electrically signaling cell | 9.27e-09 | 6 |
neuronal stem cell | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 7.68e-13 | 1 |