FFCP PHASE1:Hg19::chr7:1022943..1022954,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54905 | |EntrezGene=54905 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20243 | |HGNC=20243 | ||
|TSSclassifier=strong | |||
|UniProt=A6NJ10 | |UniProt=A6NJ10 | ||
|association_with_transcript=-39bp_to_ENST00000340150_5end | |association_with_transcript=-39bp_to_ENST00000340150_5end | ||
|cluster_id=chr7:1022943..1022954,+ | |||
|coexpression_cluster_id=C85 | |coexpression_cluster_id=C85 | ||
|description=CAGE_peak_3_at_CYP2W1_5end | |description=CAGE_peak_3_at_CYP2W1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000349!2.26e-11!3;CL:0002577!2.26e-11!3 | |ontology_enrichment_celltype=CL:0000349!2.26e-11!3;CL:0002577!2.26e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.48e-19;12!CL:0002577;1.67e-09;3 | |ontology_enrichment_celltype_v019=CL:0000182;2.48e-19;12!CL:0002577;1.67e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.56e-19,12;CL:0002577,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.15e-21;11!UBERON:0009497;6.62e-18;13!UBERON:0001041;3.78e-08;30!UBERON:0003104;9.36e-08;31 | |ontology_enrichment_development_v019=UBERON:0004161;5.15e-21;11!UBERON:0009497;6.62e-18;13!UBERON:0001041;3.78e-08;30!UBERON:0003104;9.36e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;9.88e-07;39 | |ontology_enrichment_disease_v019=DOID:7;9.88e-07;39 | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001987!8.34e-18!4;UBERON:0004340!8.34e-18!4;UBERON:0003124!2.05e-10!7;UBERON:0000160!1.56e-09!27;UBERON:0007029!3.05e-09!1;UBERON:0000995!7.11e-09!21;UBERON:0001052!7.29e-09!4;UBERON:0005795!1.84e-08!22;UBERON:0003975!1.84e-08!22;UBERON:0004175!2.01e-07!25;UBERON:0005409!2.67e-07!35;UBERON:0004907!2.97e-07!5;UBERON:0000059!5.65e-07!11 | |ontology_enrichment_uberon=UBERON:0001987!8.34e-18!4;UBERON:0004340!8.34e-18!4;UBERON:0003124!2.05e-10!7;UBERON:0000160!1.56e-09!27;UBERON:0007029!3.05e-09!1;UBERON:0000995!7.11e-09!21;UBERON:0001052!7.29e-09!4;UBERON:0005795!1.84e-08!22;UBERON:0003975!1.84e-08!22;UBERON:0004175!2.01e-07!25;UBERON:0005409!2.67e-07!35;UBERON:0004907!2.97e-07!5;UBERON:0000059!5.65e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.74e-12;19!UBERON:0006925;1.74e-12;19!UBERON:0002423;1.18e-09;25!UBERON:0001987;1.92e-07;4!UBERON:0001052;1.92e-07;4!UBERON:0002365;2.32e-07;31!UBERON:0002330;2.32e-07;31!UBERON:0002368;5.74e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.74e-12;19!UBERON:0006925;1.74e-12;19!UBERON:0002423;1.18e-09;25!UBERON:0001987;1.92e-07;4!UBERON:0001052;1.92e-07;4!UBERON:0002365;2.32e-07;31!UBERON:0002330;2.32e-07;31!UBERON:0002368;5.74e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.77e-12,19;UBERON:0006925,1.77e-12,19;UBERON:0008836,1.77e-12,19;UBERON:0008835,7.16e-11,22;UBERON:0003894,7.16e-11,22;UBERON:0009854,1.99e-10,23;UBERON:0007499,1.20e-09,25;UBERON:0009497,1.20e-09,25;UBERON:0000015,1.20e-09,25;UBERON:0002423,1.20e-09,25;UBERON:0006235,1.20e-09,25;UBERON:0004161,1.20e-09,25;UBERON:0009856,2.67e-09,26;UBERON:0002365,6.69e-08,31;UBERON:0002330,6.69e-08,31;UBERON:0001052,1.80e-07,4;UBERON:0001987,2.04e-07,4;UBERON:0004340,2.04e-07,4;UBERON:0002368,4.58e-07,35 | |||
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|short_description=p3@CYP2W1 | |short_description=p3@CYP2W1 | ||
}} | }} |
Latest revision as of 19:05, 24 September 2015
Short description: | p3@CYP2W1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYP2W1_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | -39bp_to_ENST00000340150_5end |
EntrezGene: | CYP2W1 |
HGNC: | 20243 |
UniProt: | A6NJ10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.56e-19 | 12 |
placental epithelial cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 1.77e-12 | 19 |
digestive gland | 1.77e-12 | 19 |
liver bud | 1.77e-12 | 19 |
hepatic diverticulum | 7.16e-11 | 22 |
liver primordium | 7.16e-11 | 22 |
digestive tract diverticulum | 1.99e-10 | 23 |
epithelial sac | 1.20e-09 | 25 |
epithelium of foregut-midgut junction | 1.20e-09 | 25 |
anatomical boundary | 1.20e-09 | 25 |
hepatobiliary system | 1.20e-09 | 25 |
foregut-midgut junction | 1.20e-09 | 25 |
septum transversum | 1.20e-09 | 25 |
sac | 2.67e-09 | 26 |
exocrine gland | 6.69e-08 | 31 |
exocrine system | 6.69e-08 | 31 |
rectum | 1.80e-07 | 4 |
placenta | 2.04e-07 | 4 |
allantois | 2.04e-07 | 4 |
endocrine gland | 4.58e-07 | 35 |