FFCP PHASE1:Hg19::chr4:183378727..183378731,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:183378727..183378731,+ | |||
|coexpression_cluster_id=C4398 | |coexpression_cluster_id=C4398 | ||
|description=CAGE_peak_at_chr4:183378727..183378731,+ | |description=CAGE_peak_at_chr4:183378727..183378731,+ | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;8.66e-15;3!CL:0000067;8.66e-15;3!CL:0005012;8.66e-15;3!CL:0002304;8.66e-15;3!CL:0000039;4.74e-07;7!CL:0000586;4.74e-07;7 | |ontology_enrichment_celltype_v019=CL:0000064;8.66e-15;3!CL:0000067;8.66e-15;3!CL:0005012;8.66e-15;3!CL:0002304;8.66e-15;3!CL:0000039;4.74e-07;7!CL:0000586;4.74e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.15e-14,3;CL:0000067,1.15e-14,3;CL:0005012,1.15e-14,3;CL:0002304,1.15e-14,3;CL:0000039,4.46e-07,7;CL:0000586,4.46e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.29e-12;1 | |ontology_enrichment_development_v019=UBERON:0000358;4.29e-12;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;2.93e-12;1!DOID:10165;2.93e-12;1!DOID:1798;2.93e-12;1!DOID:5409;2.49e-11;4!DOID:1325;7.63e-07;7!DOID:3904;7.63e-07;7 | |ontology_enrichment_disease_v019=DOID:1799;2.93e-12;1!DOID:10165;2.93e-12;1!DOID:1798;2.93e-12;1!DOID:5409;2.49e-11;4!DOID:1325;7.63e-07;7!DOID:3904;7.63e-07;7 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,2.63e-12,1;DOID:10165,2.63e-12,1;DOID:1798,2.63e-12,1;DOID:5409,2.63e-11,4;DOID:1325,7.86e-07,7;DOID:3904,7.86e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0003075!4.87e-13!86;UBERON:0007284!4.87e-13!86;UBERON:0002346!1.24e-12!90;UBERON:0000073!7.92e-12!94;UBERON:0001016!7.92e-12!94;UBERON:0005743!1.50e-10!86;UBERON:0001017!3.45e-10!82;UBERON:0001049!6.33e-09!57;UBERON:0005068!6.33e-09!57;UBERON:0006241!6.33e-09!57;UBERON:0007135!6.33e-09!57;UBERON:0003056!1.99e-08!61;UBERON:0004121!3.94e-08!169;UBERON:0000924!4.87e-08!173;UBERON:0006601!4.87e-08!173;UBERON:0002780!1.58e-07!41;UBERON:0001890!1.58e-07!41;UBERON:0006240!1.58e-07!41;UBERON:0003080!3.37e-07!42;UBERON:0000955!5.54e-07!69;UBERON:0006238!5.54e-07!69 | |ontology_enrichment_uberon=UBERON:0003075!4.87e-13!86;UBERON:0007284!4.87e-13!86;UBERON:0002346!1.24e-12!90;UBERON:0000073!7.92e-12!94;UBERON:0001016!7.92e-12!94;UBERON:0005743!1.50e-10!86;UBERON:0001017!3.45e-10!82;UBERON:0001049!6.33e-09!57;UBERON:0005068!6.33e-09!57;UBERON:0006241!6.33e-09!57;UBERON:0007135!6.33e-09!57;UBERON:0003056!1.99e-08!61;UBERON:0004121!3.94e-08!169;UBERON:0000924!4.87e-08!173;UBERON:0006601!4.87e-08!173;UBERON:0002780!1.58e-07!41;UBERON:0001890!1.58e-07!41;UBERON:0006240!1.58e-07!41;UBERON:0003080!3.37e-07!42;UBERON:0000955!5.54e-07!69;UBERON:0006238!5.54e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;8.66e-15;3!UBERON:0001775;8.66e-15;3!UBERON:0000488;2.49e-11;4!UBERON:0007625;4.60e-09;11!UBERON:0002203;7.58e-08;6!UBERON:0001768;7.58e-08;6!UBERON:0002200;7.58e-08;6!UBERON:0001801;3.15e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0001778;8.66e-15;3!UBERON:0001775;8.66e-15;3!UBERON:0000488;2.49e-11;4!UBERON:0007625;4.60e-09;11!UBERON:0002203;7.58e-08;6!UBERON:0001768;7.58e-08;6!UBERON:0002200;7.58e-08;6!UBERON:0001801;3.15e-07;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.15e-14,3;UBERON:0001775,1.15e-14,3;UBERON:0000488,3.07e-11,4;UBERON:0007625,5.36e-09,11;UBERON:0002203,8.71e-08,6;UBERON:0001768,8.71e-08,6;UBERON:0002200,8.71e-08,6;UBERON:0001801,3.55e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0.684372125364421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,1.03988298880475,1.55210578223795,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.538168907066586,0,0.211931901159562,0,0.103052529238439,0.515281080091258,0.18611685633159,1.18143432568886,0.194874010322397,0.252433774244115,0,0.161646056818812,0.710019185033229,0.201504196455281,0,0,0.272746120590835,0,0.121973706129595,0.397589304964456,0,0,0,3.6497735907583,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0.362578348774867,0,0,0,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0.54941678891006,0.330037999682352,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.413509717453592,0.537101224341368,0.290033387828457,0.170453254832202,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,1.94176834799221,0,0,0,0,0,0,0.422008249231538,0.222617410045812,0.824019371133798,0,0,0,0.503865495708552,1.84083628503879,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.689486746482929,0,1.38899995946634,0,0.844175070377856,0,0.552896299656123,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0.455768223388005,2.99733075704478,0.628303510868405,2.7161842980502,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0.988511511572023,0.626531697032732,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0.442306057399416,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0.274083849293502,0,0.316553979779393,0,0,0,0,0,2.51980511565014,0,0,0.124252535565433,0,0.407712618220842,0.732219924186332,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0.482259445395058,0.962776056180637,0.415440338029185,0,0,0.182248669974074,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,1.19730191562487,0,0.511164065356265,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0.5013797880454,0.612691153526923,0.327872630709804,0,0,0,0.500763722825999,0,0.443716206147409,0.124192805882767,0,0,0.303298235083296,0,0,0,0.579684114443301,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.300515217994437,0,0,0,0,0.464033759878494,0,0,0,0,0,0.385239660814607,0.428883182749851,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0.578742114812744,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.323474434190045,0,0.436838552768056,0,0,0.371807292777007,0,0.954013051960256,0,0,0.352675943690684,0,0.128458450192919,0,0.478901577171454,0.82046545696302,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0.80682027481408,0,3.92860041722134,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0,0,0.672567444437648,0.606965604236632,0.455324382702595,0.177404740325278,0.115233987555779,0,0,0.131545547125698,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.285906176706625,0.790068058663633,0.116241425368125,0.521574816907738,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78380136166353,0,0,1.05673990496671,0.0771741581079447,0,0,0.735444965261716,0,0.588925401344836,0.297046400327086,0.8453114551668,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,3.47097436825006,0,0,0.5290268405154,0,0,0,0.378499274505237,0.764859003745869,0.760191006068622,0.305966489225945,0,0.18378979906969,0,0,0.267964130156178,0.829169439458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| ||
|short_description=p@chr4:183378727..183378731,+ | |short_description=p@chr4:183378727..183378731,+ | ||
}} | }} |
Latest revision as of 03:44, 30 July 2015
Short description: | p@chr4:183378727..183378731, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:183378727..183378731, + |
Coexpression cluster: | C4398_choriocarcinoma_pancreatic_gastric_synovial_small_astrocytoma_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.15e-14 | 3 |
ciliated epithelial cell | 1.15e-14 | 3 |
multi-ciliated epithelial cell | 1.15e-14 | 3 |
non-pigmented ciliary epithelial cell | 1.15e-14 | 3 |
germ line cell | 4.46e-07 | 7 |
germ cell | 4.46e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.15e-14 | 3 |
ciliary body | 1.15e-14 | 3 |
atypical epithelium | 3.07e-11 | 4 |
pigment epithelium of eye | 5.36e-09 | 11 |
vasculature of eye | 8.71e-08 | 6 |
uvea | 8.71e-08 | 6 |
vasculature of head | 8.71e-08 | 6 |
anterior segment of eyeball | 3.55e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.63e-12 | 1 |
endocrine pancreas cancer | 2.63e-12 | 1 |
pancreatic endocrine carcinoma | 2.63e-12 | 1 |
lung small cell carcinoma | 2.63e-11 | 4 |
bronchus cancer | 7.86e-07 | 7 |
bronchogenic carcinoma | 7.86e-07 | 7 |