FFCP PHASE1:Hg19::chr15:58306295..58306302,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8854 | |EntrezGene=8854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15472 | |HGNC=15472 | ||
|TSSclassifier=strong | |||
|UniProt=E9PF31,O94788 | |UniProt=E9PF31,O94788 | ||
|association_with_transcript=0bp_to_ENST00000559517,NM_170697_5end | |association_with_transcript=0bp_to_ENST00000559517,NM_170697_5end | ||
|cluster_id=chr15:58306295..58306302,- | |||
|coexpression_cluster_id=C386 | |coexpression_cluster_id=C386 | ||
|description=CAGE_peak_30_at_ALDH1A2_5end | |description=CAGE_peak_30_at_ALDH1A2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000864!4.44e-18!1;CL:0000091!4.44e-18!1 | |ontology_enrichment_celltype=CL:0000864!4.44e-18!1;CL:0000091!4.44e-18!1 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.64e-17;25 | |ontology_enrichment_celltype_v019=CL:0000084;4.64e-17;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.64e-17,25;CL:0000827,4.64e-17,25;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!2.61e-33!8;DOID:1240!2.01e-20!39;DOID:3571!4.44e-18!1;DOID:8552!5.26e-18!1;DOID:2531!1.52e-15!51;DOID:0060083!1.52e-15!51;DOID:3350!1.03e-09!2;DOID:8692!7.80e-09!31;DOID:0050686!4.09e-07!137 | |ontology_enrichment_disease=DOID:1036!2.61e-33!8;DOID:1240!2.01e-20!39;DOID:3571!4.44e-18!1;DOID:8552!5.26e-18!1;DOID:2531!1.52e-15!51;DOID:0060083!1.52e-15!51;DOID:3350!1.03e-09!2;DOID:8692!7.80e-09!31;DOID:0050686!4.09e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:1036;9.39e-14;8!DOID:1240;3.69e-09;39 | |ontology_enrichment_disease_v019=DOID:1036;9.39e-14;8!DOID:1240;3.69e-09;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,9.39e-14,8;DOID:1240,2.03e-11,39;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.45e-17!4;UBERON:0005058!1.45e-17!4;UBERON:0009113!1.45e-17!4;UBERON:0003295!1.45e-17!4;UBERON:0005562!1.45e-17!4;UBERON:0003351!4.81e-12!6;UBERON:0004177!1.85e-10!7;UBERON:0003127!2.02e-09!2;UBERON:0000974!1.37e-07!10;UBERON:0003408!1.37e-07!10;UBERON:0001042!1.37e-07!10;UBERON:0009145!1.37e-07!10;UBERON:0006562!5.64e-07!11;UBERON:0009722!5.64e-07!11;UBERON:0007690!5.64e-07!11;UBERON:0003497!6.88e-07!3;UBERON:0003909!6.88e-07!3;UBERON:0003835!6.88e-07!3;UBERON:0001281!6.88e-07!3;UBERON:0002240!8.15e-07!3 | |ontology_enrichment_uberon=UBERON:0002370!1.45e-17!4;UBERON:0005058!1.45e-17!4;UBERON:0009113!1.45e-17!4;UBERON:0003295!1.45e-17!4;UBERON:0005562!1.45e-17!4;UBERON:0003351!4.81e-12!6;UBERON:0004177!1.85e-10!7;UBERON:0003127!2.02e-09!2;UBERON:0000974!1.37e-07!10;UBERON:0003408!1.37e-07!10;UBERON:0001042!1.37e-07!10;UBERON:0009145!1.37e-07!10;UBERON:0006562!5.64e-07!11;UBERON:0009722!5.64e-07!11;UBERON:0007690!5.64e-07!11;UBERON:0003497!6.88e-07!3;UBERON:0003909!6.88e-07!3;UBERON:0003835!6.88e-07!3;UBERON:0001281!6.88e-07!3;UBERON:0002240!8.15e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p30@ALDH1A2 | |short_description=p30@ALDH1A2 | ||
}} | }} |
Latest revision as of 06:42, 18 September 2015
Short description: | p30@ALDH1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_ALDH1A2_5end |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | 0bp_to_ENST00000559517, NM_170697_5end |
EntrezGene: | ALDH1A2 |
HGNC: | 15472 |
UniProt: | E9PF31O94788 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.64e-17 | 25 |
pro-T cell | 4.64e-17 | 25 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.39e-14 | 8 |
leukemia | 2.03e-11 | 39 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |