FFCP PHASE1:Hg19::chr19:4867666..4867686,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10226 | |EntrezGene=10226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16893 | |HGNC=16893 | ||
|TSSclassifier=strong | |||
|UniProt=O60664 | |UniProt=O60664 | ||
|association_with_transcript=93bp_to_ENST00000221957,NM_001164189,NM_001164194,NM_005817,uc002mbj.2,uc002mbk.2,uc002mbl.3_5end | |association_with_transcript=93bp_to_ENST00000221957,NM_001164189,NM_001164194,NM_005817,uc002mbj.2,uc002mbk.2,uc002mbl.3_5end | ||
|cluster_id=chr19:4867666..4867686,- | |||
|description=CAGE_peak_1_at_PLIN3_5end | |description=CAGE_peak_1_at_PLIN3_5end | ||
|id=chr19:4867666..4867686,- | |id=chr19:4867666..4867686,- | ||
|ontology_enrichment_celltype=CL:0002371!2.05e-35!591;CL:0000144!2.32e-34!625;CL:0000055!1.80e-33!180;CL:0000548!5.59e-29!679;CL:0000004!5.59e-29!679;CL:0000255!5.59e-29!679;CL:0000012!1.37e-28!682;CL:0000183!1.69e-20!59;CL:0000680!2.73e-20!57;CL:0000056!2.73e-20!57;CL:0000355!2.73e-20!57;CL:0000222!3.64e-19!119;CL:0000187!1.05e-18!54;CL:0000003!5.87e-18!722;CL:0000057!1.13e-17!75;CL:0000192!1.48e-15!42;CL:0000514!1.48e-15!42;CL:0000048!4.12e-15!430;CL:0000393!7.20e-15!60;CL:0000211!7.20e-15!60;CL:0000723!7.65e-15!436;CL:0000220!7.72e-15!246;CL:0002321!1.49e-14!248;CL:0000034!5.97e-14!444;CL:0000359!7.35e-13!32;CL:0000063!1.82e-09!578;CL:0002620!5.77e-09!23 | |ontology_enrichment_celltype=CL:0002371!2.05e-35!591;CL:0000144!2.32e-34!625;CL:0000055!1.80e-33!180;CL:0000548!5.59e-29!679;CL:0000004!5.59e-29!679;CL:0000255!5.59e-29!679;CL:0000012!1.37e-28!682;CL:0000183!1.69e-20!59;CL:0000680!2.73e-20!57;CL:0000056!2.73e-20!57;CL:0000355!2.73e-20!57;CL:0000222!3.64e-19!119;CL:0000187!1.05e-18!54;CL:0000003!5.87e-18!722;CL:0000057!1.13e-17!75;CL:0000192!1.48e-15!42;CL:0000514!1.48e-15!42;CL:0000048!4.12e-15!430;CL:0000393!7.20e-15!60;CL:0000211!7.20e-15!60;CL:0000723!7.65e-15!436;CL:0000220!7.72e-15!246;CL:0002321!1.49e-14!248;CL:0000034!5.97e-14!444;CL:0000359!7.35e-13!32;CL:0000063!1.82e-09!578;CL:0002620!5.77e-09!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.55e-12;32!CL:0000192;4.88e-11;43!CL:0000187;1.62e-10;55!CL:0002620;5.74e-09;23!CL:0000134;4.29e-08;55!CL:0000393;5.83e-08;61!CL:0000211;5.83e-08;61!CL:0000723;1.50e-07;61!CL:0000057;1.74e-07;73!CL:0000048;3.31e-07;58!CL:0002320;4.90e-07;188 | |ontology_enrichment_celltype_v019=CL:0000359;4.55e-12;32!CL:0000192;4.88e-11;43!CL:0000187;1.62e-10;55!CL:0002620;5.74e-09;23!CL:0000134;4.29e-08;55!CL:0000393;5.83e-08;61!CL:0000211;5.83e-08;61!CL:0000723;1.50e-07;61!CL:0000057;1.74e-07;73!CL:0000048;3.31e-07;58!CL:0002320;4.90e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.03e-20,58;CL:0000056,4.03e-20,58;CL:0000355,4.03e-20,58;CL:0000222,4.34e-19,121;CL:0000187,1.52e-18,55;CL:0000057,1.09e-17,76;CL:0000192,2.22e-15,43;CL:0000514,2.22e-15,43;CL:0000048,2.99e-15,427;CL:0000723,5.58e-15,433;CL:0000393,8.93e-15,61;CL:0000211,8.93e-15,61;CL:0002321,1.32e-14,250;CL:0000034,4.44e-14,441;CL:0000359,7.35e-13,32;CL:0002620,5.77e-09,23 | |||
|ontology_enrichment_development_v019=CL:0000514;4.88e-11;43!CL:0000355;5.43e-11;58 | |ontology_enrichment_development_v019=CL:0000514;4.88e-11;43!CL:0000355;5.43e-11;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.60e-25!83;UBERON:0002329!5.60e-25!83;UBERON:0003077!5.60e-25!83;UBERON:0003059!5.60e-25!83;UBERON:0007282!5.60e-25!83;UBERON:0009618!5.60e-25!83;UBERON:0007285!5.60e-25!83;UBERON:0000486!2.96e-24!82;UBERON:0004290!1.99e-22!70;UBERON:0005256!3.51e-21!143;UBERON:0001134!1.81e-18!61;UBERON:0002036!1.81e-18!61;UBERON:0003082!1.81e-18!61;UBERON:0002385!5.10e-18!63;UBERON:0001015!5.10e-18!63;UBERON:0000383!5.10e-18!63;UBERON:0002204!1.22e-15!167;UBERON:0002100!1.89e-13!216;UBERON:0000926!2.48e-13!448;UBERON:0004120!2.48e-13!448;UBERON:0006603!2.48e-13!448;UBERON:0003102!1.76e-11!95;UBERON:0000490!2.41e-11!138;UBERON:0001637!4.11e-11!42;UBERON:0003509!4.11e-11!42;UBERON:0004572!4.11e-11!42;UBERON:0000468!2.54e-10!659;UBERON:0002049!4.96e-10!79;UBERON:0007798!4.96e-10!79;UBERON:0000475!4.98e-10!365;UBERON:0000467!1.21e-09!625;UBERON:0000480!1.68e-09!626;UBERON:0003914!1.86e-09!118;UBERON:0002199!4.58e-09!45;UBERON:0002416!4.58e-09!45;UBERON:0004872!6.16e-09!84;UBERON:0003104!1.35e-08!238;UBERON:0009142!1.35e-08!238;UBERON:0004573!1.88e-08!33;UBERON:0004571!1.88e-08!33;UBERON:0003081!2.22e-08!216;UBERON:0001981!4.35e-08!60;UBERON:0007500!4.35e-08!60;UBERON:0004537!4.35e-08!60;UBERON:0006965!4.35e-08!60;UBERON:0002097!1.80e-07!40;UBERON:0000055!4.70e-07!69;UBERON:0000923!8.26e-07!604;UBERON:0005291!8.26e-07!604;UBERON:0006598!8.26e-07!604;UBERON:0002532!8.26e-07!604;UBERON:0002050!8.54e-07!605;UBERON:0005423!8.54e-07!605;UBERON:0000479!9.54e-07!787;UBERON:0004535!9.67e-07!110 | |ontology_enrichment_uberon=UBERON:0000914!5.60e-25!83;UBERON:0002329!5.60e-25!83;UBERON:0003077!5.60e-25!83;UBERON:0003059!5.60e-25!83;UBERON:0007282!5.60e-25!83;UBERON:0009618!5.60e-25!83;UBERON:0007285!5.60e-25!83;UBERON:0000486!2.96e-24!82;UBERON:0004290!1.99e-22!70;UBERON:0005256!3.51e-21!143;UBERON:0001134!1.81e-18!61;UBERON:0002036!1.81e-18!61;UBERON:0003082!1.81e-18!61;UBERON:0002385!5.10e-18!63;UBERON:0001015!5.10e-18!63;UBERON:0000383!5.10e-18!63;UBERON:0002204!1.22e-15!167;UBERON:0002100!1.89e-13!216;UBERON:0000926!2.48e-13!448;UBERON:0004120!2.48e-13!448;UBERON:0006603!2.48e-13!448;UBERON:0003102!1.76e-11!95;UBERON:0000490!2.41e-11!138;UBERON:0001637!4.11e-11!42;UBERON:0003509!4.11e-11!42;UBERON:0004572!4.11e-11!42;UBERON:0000468!2.54e-10!659;UBERON:0002049!4.96e-10!79;UBERON:0007798!4.96e-10!79;UBERON:0000475!4.98e-10!365;UBERON:0000467!1.21e-09!625;UBERON:0000480!1.68e-09!626;UBERON:0003914!1.86e-09!118;UBERON:0002199!4.58e-09!45;UBERON:0002416!4.58e-09!45;UBERON:0004872!6.16e-09!84;UBERON:0003104!1.35e-08!238;UBERON:0009142!1.35e-08!238;UBERON:0004573!1.88e-08!33;UBERON:0004571!1.88e-08!33;UBERON:0003081!2.22e-08!216;UBERON:0001981!4.35e-08!60;UBERON:0007500!4.35e-08!60;UBERON:0004537!4.35e-08!60;UBERON:0006965!4.35e-08!60;UBERON:0002097!1.80e-07!40;UBERON:0000055!4.70e-07!69;UBERON:0000923!8.26e-07!604;UBERON:0005291!8.26e-07!604;UBERON:0006598!8.26e-07!604;UBERON:0002532!8.26e-07!604;UBERON:0002050!8.54e-07!605;UBERON:0005423!8.54e-07!605;UBERON:0000479!9.54e-07!787;UBERON:0004535!9.67e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.16e-08;42!UBERON:0003509;9.16e-08;42!UBERON:0004572;9.16e-08;42!UBERON:0004573;1.45e-07;33!UBERON:0004571;1.45e-07;33!UBERON:0003102;8.52e-07;50!UBERON:0003914;8.83e-07;74 | |ontology_enrichment_uberon_v019=UBERON:0001637;9.16e-08;42!UBERON:0003509;9.16e-08;42!UBERON:0004572;9.16e-08;42!UBERON:0004573;1.45e-07;33!UBERON:0004571;1.45e-07;33!UBERON:0003102;8.52e-07;50!UBERON:0003914;8.83e-07;74 | ||
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| ||
|short_description=p1@PLIN3 | |short_description=p1@PLIN3 | ||
}} | }} |
Latest revision as of 01:34, 19 September 2015
Short description: | p1@PLIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLIN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_ENST00000221957, NM_001164189, NM_001164194, NM_005817, uc002mbj.2, uc002mbk.2, uc002mbl.3_5end |
EntrezGene: | PLIN3 |
HGNC: | 16893 |
UniProt: | O60664 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.03e-20 | 58 |
myoblast | 4.03e-20 | 58 |
multi-potent skeletal muscle stem cell | 4.03e-20 | 58 |
mesodermal cell | 4.34e-19 | 121 |
muscle cell | 1.52e-18 | 55 |
fibroblast | 1.09e-17 | 76 |
smooth muscle cell | 2.22e-15 | 43 |
smooth muscle myoblast | 2.22e-15 | 43 |
multi fate stem cell | 2.99e-15 | 427 |
somatic stem cell | 5.58e-15 | 433 |
electrically responsive cell | 8.93e-15 | 61 |
electrically active cell | 8.93e-15 | 61 |
embryonic cell | 1.32e-14 | 250 |
stem cell | 4.44e-14 | 441 |
vascular associated smooth muscle cell | 7.35e-13 | 32 |
skin fibroblast | 5.77e-09 | 23 |