FFCP PHASE1:Hg19::chr19:13213954..13214021,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4066 | |EntrezGene=4066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6734 | |HGNC=6734 | ||
|TSSclassifier=strong | |||
|UniProt=P12980 | |UniProt=P12980 | ||
|association_with_transcript=0bp_to_NM_005583_5end | |association_with_transcript=0bp_to_NM_005583_5end | ||
|cluster_id=chr19:13213954..13214021,- | |||
|coexpression_cluster_id=C3755 | |coexpression_cluster_id=C3755 | ||
|description=CAGE_peak_4_at_LYL1_5end | |description=CAGE_peak_4_at_LYL1_5end | ||
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|ontology_enrichment_celltype=CL:0000037!3.48e-61!172;CL:0000566!3.48e-61!172;CL:0002032!4.45e-58!165;CL:0000837!4.45e-58!165;CL:0000988!8.32e-57!182;CL:0000763!1.48e-52!112;CL:0000049!1.48e-52!112;CL:0000738!3.25e-44!140;CL:0000766!2.82e-38!76;CL:0002087!1.93e-37!119;CL:0002031!1.44e-36!124;CL:0000839!2.14e-34!70;CL:0000557!4.58e-33!71;CL:0002194!4.11e-32!63;CL:0000576!4.11e-32!63;CL:0000040!4.11e-32!63;CL:0000559!4.11e-32!63;CL:0002009!1.97e-30!65;CL:0002057!9.68e-24!42;CL:0000860!4.15e-21!45;CL:0000945!1.68e-15!24;CL:0000826!1.68e-15!24;CL:0000236!1.57e-11!14;CL:0000134!2.31e-08!358;CL:0002320!1.39e-07!365;CL:0000542!3.34e-07!53;CL:0000051!3.34e-07!53 | |ontology_enrichment_celltype=CL:0000037!3.48e-61!172;CL:0000566!3.48e-61!172;CL:0002032!4.45e-58!165;CL:0000837!4.45e-58!165;CL:0000988!8.32e-57!182;CL:0000763!1.48e-52!112;CL:0000049!1.48e-52!112;CL:0000738!3.25e-44!140;CL:0000766!2.82e-38!76;CL:0002087!1.93e-37!119;CL:0002031!1.44e-36!124;CL:0000839!2.14e-34!70;CL:0000557!4.58e-33!71;CL:0002194!4.11e-32!63;CL:0000576!4.11e-32!63;CL:0000040!4.11e-32!63;CL:0000559!4.11e-32!63;CL:0002009!1.97e-30!65;CL:0002057!9.68e-24!42;CL:0000860!4.15e-21!45;CL:0000945!1.68e-15!24;CL:0000826!1.68e-15!24;CL:0000236!1.57e-11!14;CL:0000134!2.31e-08!358;CL:0002320!1.39e-07!365;CL:0000542!3.34e-07!53;CL:0000051!3.34e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.58e-26;39!CL:0000234;4.58e-26;39!CL:0000576;1.65e-24;48!CL:0000766;9.44e-24;69!CL:0000860;1.38e-22;33!CL:0002057;1.38e-22;33!CL:0000763;1.07e-21;100!CL:0000236;4.58e-13;13!CL:0000738;4.35e-11;136!CL:0000945;6.37e-11;24!CL:0000235;1.48e-10;6!CL:0000988;8.15e-10;177!CL:0002087;6.37e-09;104!CL:0000094;2.89e-08;8 | |ontology_enrichment_celltype_v019=CL:0000473;4.58e-26;39!CL:0000234;4.58e-26;39!CL:0000576;1.65e-24;48!CL:0000766;9.44e-24;69!CL:0000860;1.38e-22;33!CL:0002057;1.38e-22;33!CL:0000763;1.07e-21;100!CL:0000236;4.58e-13;13!CL:0000738;4.35e-11;136!CL:0000945;6.37e-11;24!CL:0000235;1.48e-10;6!CL:0000988;8.15e-10;177!CL:0002087;6.37e-09;104!CL:0000094;2.89e-08;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.25e-71,108;CL:0000049,9.25e-71,108;CL:0002032,1.79e-64,161;CL:0000837,1.79e-64,161;CL:0000037,5.14e-64,168;CL:0000766,8.37e-60,72;CL:0000988,2.68e-59,177;CL:0000557,1.40e-51,67;CL:0000839,2.43e-50,66;CL:0002194,4.35e-49,59;CL:0000576,4.35e-49,59;CL:0000040,4.35e-49,59;CL:0000559,4.35e-49,59;CL:0000738,5.73e-47,136;CL:0002009,5.78e-47,61;CL:0002031,4.32e-40,120;CL:0002087,7.89e-40,115;CL:0000473,1.44e-37,48;CL:0000234,1.44e-37,48;CL:0000860,3.28e-29,42;CL:0002057,3.28e-29,42;CL:0000134,2.03e-16,354;CL:0002320,1.35e-15,361;CL:0000236,6.71e-14,14;CL:0000219,9.87e-13,386;CL:0000945,8.04e-11,24;CL:0000826,8.04e-11,24;CL:0000235,1.51e-10,6;CL:0000048,2.44e-09,427;CL:0000723,6.97e-09,433;CL:0000034,8.97e-09,441;CL:0000094,3.23e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000049;1.28e-21;108!CL:0002057;4.92e-21;42 | |ontology_enrichment_development_v019=CL:0000049;1.28e-21;108!CL:0002057;4.92e-21;42 | ||
|ontology_enrichment_disease=DOID:8692!1.71e-15!31;DOID:2531!4.68e-14!51;DOID:0060083!4.68e-14!51;DOID:1240!5.76e-14!39 | |ontology_enrichment_disease=DOID:8692!1.71e-15!31;DOID:2531!4.68e-14!51;DOID:0060083!4.68e-14!51;DOID:1240!5.76e-14!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.24e-16;31!DOID:1240;1.73e-11;39!DOID:2531;3.85e-08;51!DOID:0060083;3.85e-08;51 | |ontology_enrichment_disease_v019=DOID:8692;1.24e-16;31!DOID:1240;1.73e-11;39!DOID:2531;3.85e-08;51!DOID:0060083;3.85e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,1.45e-17,31;DOID:1240,4.34e-14,39;DOID:2531,2.04e-12,51;DOID:0060083,2.04e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.71e-39!102;UBERON:0003061!6.71e-39!102;UBERON:0002193!4.43e-35!112;UBERON:0007023!1.10e-31!115;UBERON:0002371!1.85e-29!80;UBERON:0001474!1.07e-25!86;UBERON:0002405!5.87e-20!115;UBERON:0004765!4.11e-19!101;UBERON:0001434!4.11e-19!101;UBERON:0001049!8.65e-12!57;UBERON:0005068!8.65e-12!57;UBERON:0006241!8.65e-12!57;UBERON:0007135!8.65e-12!57;UBERON:0000178!2.99e-09!15;UBERON:0000179!2.99e-09!15;UBERON:0000463!2.99e-09!15;UBERON:0002616!4.00e-09!59;UBERON:0003080!5.71e-09!42;UBERON:0003081!8.03e-09!216;UBERON:0002780!1.35e-08!41;UBERON:0001890!1.35e-08!41;UBERON:0006240!1.35e-08!41;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0001893!1.96e-07!34;UBERON:0002791!3.70e-07!33;UBERON:0003075!6.41e-07!86;UBERON:0007284!6.41e-07!86;UBERON:0002384!6.88e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!6.71e-39!102;UBERON:0003061!6.71e-39!102;UBERON:0002193!4.43e-35!112;UBERON:0007023!1.10e-31!115;UBERON:0002371!1.85e-29!80;UBERON:0001474!1.07e-25!86;UBERON:0002405!5.87e-20!115;UBERON:0004765!4.11e-19!101;UBERON:0001434!4.11e-19!101;UBERON:0001049!8.65e-12!57;UBERON:0005068!8.65e-12!57;UBERON:0006241!8.65e-12!57;UBERON:0007135!8.65e-12!57;UBERON:0000178!2.99e-09!15;UBERON:0000179!2.99e-09!15;UBERON:0000463!2.99e-09!15;UBERON:0002616!4.00e-09!59;UBERON:0003080!5.71e-09!42;UBERON:0003081!8.03e-09!216;UBERON:0002780!1.35e-08!41;UBERON:0001890!1.35e-08!41;UBERON:0006240!1.35e-08!41;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0001893!1.96e-07!34;UBERON:0002791!3.70e-07!33;UBERON:0003075!6.41e-07!86;UBERON:0007284!6.41e-07!86;UBERON:0002384!6.88e-07!375 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-55,98;UBERON:0003061,1.28e-55,98;UBERON:0002193,6.18e-52,108;UBERON:0002371,1.28e-47,76;UBERON:0002405,2.04e-43,93;UBERON:0001474,7.87e-43,82;UBERON:0004765,1.89e-37,90;UBERON:0001434,5.91e-32,100;UBERON:0003081,1.23e-17,203;UBERON:0002384,4.74e-15,371;UBERON:0002204,2.98e-13,167;UBERON:0000178,8.93e-09,15;UBERON:0000179,8.93e-09,15;UBERON:0000463,8.93e-09,15 | |||
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| ||
|short_description=p4@LYL1 | |short_description=p4@LYL1 | ||
}} | }} |
Latest revision as of 00:11, 16 September 2015
Short description: | p4@LYL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LYL1_5end |
Coexpression cluster: | C3755_CD14CD16_acute_CD19_granulocyte_CD133_CD14_Whole |
Association with transcript: | 0bp_to_NM_005583_5end |
EntrezGene: | LYL1 |
HGNC: | 6734 |
UniProt: | P12980 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-55 | 98 |
blood island | 1.28e-55 | 98 |
hemolymphoid system | 6.18e-52 | 108 |
bone marrow | 1.28e-47 | 76 |
immune system | 2.04e-43 | 93 |
bone element | 7.87e-43 | 82 |
skeletal element | 1.89e-37 | 90 |
skeletal system | 5.91e-32 | 100 |
lateral plate mesoderm | 1.23e-17 | 203 |
connective tissue | 4.74e-15 | 371 |
musculoskeletal system | 2.98e-13 | 167 |
blood | 8.93e-09 | 15 |
haemolymphatic fluid | 8.93e-09 | 15 |
organism substance | 8.93e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.45e-17 | 31 |
leukemia | 4.34e-14 | 39 |
hematologic cancer | 2.04e-12 | 51 |
immune system cancer | 2.04e-12 | 51 |