FFCP PHASE1:Hg19::chr11:17741084..17741094,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4654 | |EntrezGene=4654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7611 | |HGNC=7611 | ||
|TSSclassifier=strong | |||
|UniProt=P15172 | |UniProt=P15172 | ||
|association_with_transcript=-15bp_to_NM_002478,uc001mni.2_5end | |association_with_transcript=-15bp_to_NM_002478,uc001mni.2_5end | ||
|cluster_id=chr11:17741084..17741094,+ | |||
|coexpression_cluster_id=C737 | |coexpression_cluster_id=C737 | ||
|description=CAGE_peak_3_at_MYOD1_5end | |description=CAGE_peak_3_at_MYOD1_5end | ||
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|ontology_enrichment_celltype=CL:0000188!2.48e-33!9;CL:0000515!2.70e-16!4;CL:0002586!5.68e-12!3;CL:0000594!6.12e-12!3;CL:0002603!1.54e-11!3;CL:0000680!6.57e-10!57;CL:0000056!6.57e-10!57;CL:0000355!6.57e-10!57;CL:0000149!4.37e-09!4 | |ontology_enrichment_celltype=CL:0000188!2.48e-33!9;CL:0000515!2.70e-16!4;CL:0002586!5.68e-12!3;CL:0000594!6.12e-12!3;CL:0002603!1.54e-11!3;CL:0000680!6.57e-10!57;CL:0000056!6.57e-10!57;CL:0000355!6.57e-10!57;CL:0000149!4.37e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000188;1.44e-39;9!CL:0000680;8.95e-38;7!CL:0000056;2.93e-30;4!CL:0000515;3.45e-23;3!CL:0000594;9.35e-11;3!CL:0000228;7.75e-09;1!CL:0002372;7.75e-09;1!CL:0002321;3.30e-08;15 | |ontology_enrichment_celltype_v019=CL:0000188;1.44e-39;9!CL:0000680;8.95e-38;7!CL:0000056;2.93e-30;4!CL:0000515;3.45e-23;3!CL:0000594;9.35e-11;3!CL:0000228;7.75e-09;1!CL:0002372;7.75e-09;1!CL:0002321;3.30e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.57e-39,9;CL:0000515,2.62e-30,4;CL:0000680,3.52e-11,58;CL:0000056,3.52e-11,58;CL:0000355,3.52e-11,58;CL:0000594,1.26e-10,3;CL:0000228,6.65e-09,1;CL:0002372,6.65e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000515;2.93e-30;4!UBERON:0004874;1.53e-08;1!CL:0000355;5.22e-08;58 | |ontology_enrichment_development_v019=CL:0000515;2.93e-30;4!UBERON:0004874;1.53e-08;1!CL:0000355;5.22e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;3.61e-88;16!UBERON:0002036;3.61e-88;16!UBERON:0002385;6.11e-44;31!UBERON:0001015;6.11e-44;31!UBERON:0000383;6.11e-44;31!UBERON:0000341;8.18e-16;2!UBERON:0005090;1.15e-15;2!UBERON:0001630;1.15e-15;2!UBERON:0001723;5.98e-11;3!UBERON:0001033;5.98e-11;3!UBERON:0002204;7.18e-09;70!UBERON:0002426;7.75e-09;1!UBERON:0003831;7.75e-09;1!UBERON:0003898;7.75e-09;1!UBERON:0004830;7.75e-09;1!UBERON:0003830;7.75e-09;1!UBERON:0005175;7.75e-09;1!UBERON:0001774;7.75e-09;1!UBERON:0001103;7.75e-09;1!UBERON:0007029;1.53e-08;1!UBERON:0000989;1.53e-08;1!UBERON:0001389;1.53e-08;1!UBERON:0000026;1.53e-08;1!UBERON:0008784;1.53e-08;1!UBERON:0006058;1.53e-08;1!UBERON:0008811;1.53e-08;1!UBERON:0003663;1.53e-08;1!UBERON:0004256;1.53e-08;1!UBERON:0004708;1.53e-08;1!UBERON:0002101;1.53e-08;1!UBERON:0004709;1.53e-08;1!UBERON:0002529;1.53e-08;1!UBERON:0010538;1.53e-08;1!UBERON:0003661;1.53e-08;1!UBERON:0010890;1.53e-08;1!UBERON:0002471;1.53e-08;1!UBERON:0001383;1.53e-08;1!UBERON:0010758;1.53e-08;1!UBERON:0010707;1.53e-08;1!UBERON:0000978;1.53e-08;1!UBERON:0002103;1.53e-08;1!UBERON:0001665;1.53e-08;1!UBERON:0003823;1.53e-08;1!UBERON:0000154;1.53e-08;1!UBERON:0010709;1.53e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0001134;3.61e-88;16!UBERON:0002036;3.61e-88;16!UBERON:0002385;6.11e-44;31!UBERON:0001015;6.11e-44;31!UBERON:0000383;6.11e-44;31!UBERON:0000341;8.18e-16;2!UBERON:0005090;1.15e-15;2!UBERON:0001630;1.15e-15;2!UBERON:0001723;5.98e-11;3!UBERON:0001033;5.98e-11;3!UBERON:0002204;7.18e-09;70!UBERON:0002426;7.75e-09;1!UBERON:0003831;7.75e-09;1!UBERON:0003898;7.75e-09;1!UBERON:0004830;7.75e-09;1!UBERON:0003830;7.75e-09;1!UBERON:0005175;7.75e-09;1!UBERON:0001774;7.75e-09;1!UBERON:0001103;7.75e-09;1!UBERON:0007029;1.53e-08;1!UBERON:0000989;1.53e-08;1!UBERON:0001389;1.53e-08;1!UBERON:0000026;1.53e-08;1!UBERON:0008784;1.53e-08;1!UBERON:0006058;1.53e-08;1!UBERON:0008811;1.53e-08;1!UBERON:0003663;1.53e-08;1!UBERON:0004256;1.53e-08;1!UBERON:0004708;1.53e-08;1!UBERON:0002101;1.53e-08;1!UBERON:0004709;1.53e-08;1!UBERON:0002529;1.53e-08;1!UBERON:0010538;1.53e-08;1!UBERON:0003661;1.53e-08;1!UBERON:0010890;1.53e-08;1!UBERON:0002471;1.53e-08;1!UBERON:0001383;1.53e-08;1!UBERON:0010758;1.53e-08;1!UBERON:0010707;1.53e-08;1!UBERON:0000978;1.53e-08;1!UBERON:0002103;1.53e-08;1!UBERON:0001665;1.53e-08;1!UBERON:0003823;1.53e-08;1!UBERON:0000154;1.53e-08;1!UBERON:0010709;1.53e-08;1 | ||
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|short_description=p3@MYOD1 | |short_description=p3@MYOD1 | ||
}} | }} |
Latest revision as of 00:39, 17 September 2015
Short description: | p3@MYOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYOD1_5end |
Coexpression cluster: | C737_rhabdomyosarcoma_skeletal_mesenchymal_Skeletal_Pericytes_tongue_diaphragm |
Association with transcript: | -15bp_to_NM_002478, uc001mni.2_5end |
EntrezGene: | MYOD1 |
HGNC: | 7611 |
UniProt: | P15172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.57e-39 | 9 |
skeletal muscle myoblast | 2.62e-30 | 4 |
muscle precursor cell | 3.52e-11 | 58 |
myoblast | 3.52e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.52e-11 | 58 |
skeletal muscle satellite cell | 1.26e-10 | 3 |
multinucleate cell | 6.65e-09 | 1 |
myotube | 6.65e-09 | 1 |