FFCP PHASE1:Hg19::chr14:51259568..51259605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:51259568..51259605,- | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_at_chr14:51259568..51259605,- | |description=CAGE_peak_at_chr14:51259568..51259605,- | ||
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|ontology_enrichment_celltype=CL:0000236!2.38e-11!14;CL:0000542!3.46e-11!53;CL:0000051!3.46e-11!53;CL:0000838!2.40e-10!52;CL:0000945!2.73e-10!24;CL:0000826!2.73e-10!24;CL:0000738!7.30e-09!140;CL:0002087!6.18e-08!119;CL:0002031!1.25e-07!124;CL:0000037!9.10e-07!172;CL:0000566!9.10e-07!172 | |ontology_enrichment_celltype=CL:0000236!2.38e-11!14;CL:0000542!3.46e-11!53;CL:0000051!3.46e-11!53;CL:0000838!2.40e-10!52;CL:0000945!2.73e-10!24;CL:0000826!2.73e-10!24;CL:0000738!7.30e-09!140;CL:0002087!6.18e-08!119;CL:0002031!1.25e-07!124;CL:0000037!9.10e-07!172;CL:0000566!9.10e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000946;1.19e-11;1!CL:0000786;1.19e-11;1!CL:0000945;3.91e-07;24 | |ontology_enrichment_celltype_v019=CL:0000946;1.19e-11;1!CL:0000786;1.19e-11;1!CL:0000945;3.91e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,8.64e-12,1;CL:0000786,8.64e-12,1;CL:0000980,8.64e-12,1;CL:0000236,3.19e-07,14;CL:0000945,3.60e-07,24;CL:0000826,3.60e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.63e-12;1!UBERON:0010227;3.45e-12;1!UBERON:0010226;4.78e-12;1!UBERON:0000358;6.26e-12;1!UBERON:0005062;9.37e-12;4!UBERON:0007284;9.37e-12;4!UBERON:0003104;4.41e-08;31 | |ontology_enrichment_development_v019=UBERON:0004140;2.63e-12;1!UBERON:0010227;3.45e-12;1!UBERON:0010226;4.78e-12;1!UBERON:0000358;6.26e-12;1!UBERON:0005062;9.37e-12;4!UBERON:0007284;9.37e-12;4!UBERON:0003104;4.41e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.58e-22;2!DOID:178;4.06e-12;1!DOID:326;4.06e-12;1!DOID:3978;4.06e-12;1!DOID:3394;4.06e-12;1!DOID:5844;4.06e-12;1!DOID:630;6.26e-12;1!DOID:0050177;6.26e-12;1!DOID:0050427;6.26e-12;1!DOID:1287;9.37e-12;4!DOID:12603;1.19e-11;1 | |ontology_enrichment_disease_v019=DOID:114;1.58e-22;2!DOID:178;4.06e-12;1!DOID:326;4.06e-12;1!DOID:3978;4.06e-12;1!DOID:3394;4.06e-12;1!DOID:5844;4.06e-12;1!DOID:630;6.26e-12;1!DOID:0050177;6.26e-12;1!DOID:0050427;6.26e-12;1!DOID:1287;9.37e-12;4!DOID:12603;1.19e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:114,1.66e-22,2;DOID:178,4.06e-12,1;DOID:326,4.06e-12,1;DOID:3978,4.06e-12,1;DOID:3394,4.06e-12,1;DOID:5844,4.06e-12,1;DOID:630,5.62e-12,1;DOID:0050177,5.62e-12,1;DOID:0050427,5.62e-12,1;DOID:12603,9.61e-12,1;DOID:1287,9.63e-12,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.49e-26;25!UBERON:0003978;2.34e-15;3!UBERON:0000946;2.34e-15;3!UBERON:0004151;2.60e-15;3!UBERON:0002135;2.93e-12;1!UBERON:0002079;3.45e-12;1!UBERON:0000948;3.48e-12;22!UBERON:0002084;4.78e-12;1!UBERON:0002146;4.78e-12;1!UBERON:0002082;4.78e-12;1!UBERON:0005623;4.78e-12;1!UBERON:0002133;9.43e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0007100;1.49e-26;25!UBERON:0003978;2.34e-15;3!UBERON:0000946;2.34e-15;3!UBERON:0004151;2.60e-15;3!UBERON:0002135;2.93e-12;1!UBERON:0002079;3.45e-12;1!UBERON:0000948;3.48e-12;22!UBERON:0002084;4.78e-12;1!UBERON:0002146;4.78e-12;1!UBERON:0002082;4.78e-12;1!UBERON:0005623;4.78e-12;1!UBERON:0002133;9.43e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.64e-24,27;UBERON:0003978,2.26e-15,3;UBERON:0009751,2.26e-15,3;UBERON:0000946,2.26e-15,3;UBERON:0002523,2.26e-15,3;UBERON:0005983,2.26e-15,3;UBERON:0002165,2.26e-15,3;UBERON:0002062,2.26e-15,3;UBERON:0007280,2.26e-15,3;UBERON:0004151,2.60e-15,3;UBERON:0002135,2.93e-12,1;UBERON:0002079,3.27e-12,1;UBERON:0002146,4.53e-12,1;UBERON:0005623,4.53e-12,1;UBERON:0002084,5.05e-12,1;UBERON:0002082,5.05e-12,1;UBERON:0010226,5.05e-12,1;UBERON:0000948,3.65e-11,24;UBERON:0005498,3.65e-11,24;UBERON:0004140,3.65e-11,24;UBERON:0009881,3.65e-11,24;UBERON:0004141,3.65e-11,24;UBERON:0003084,3.65e-11,24;UBERON:0007005,3.65e-11,24;UBERON:0004139,3.65e-11,24;UBERON:0004291,3.65e-11,24;UBERON:0003103,3.52e-09,68;UBERON:0004797,4.33e-07,7;UBERON:0002133,9.44e-07,2;UBERON:0002081,9.96e-07,2;UBERON:0010227,9.96e-07,2 | |||
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|short_description=p@chr14:51259568..51259605,- | |short_description=p@chr14:51259568..51259605,- | ||
}} | }} |
Latest revision as of 20:57, 24 July 2015
Short description: | p@chr14:51259568..51259605, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:51259568..51259605, - |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 8.64e-12 | 1 |
plasma cell | 8.64e-12 | 1 |
plasmablast | 8.64e-12 | 1 |
B cell | 3.19e-07 | 14 |
lymphocyte of B lineage | 3.60e-07 | 24 |
pro-B cell | 3.60e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.64e-24 | 27 |
valve | 2.26e-15 | 3 |
cardiac mesenchyme | 2.26e-15 | 3 |
cardial valve | 2.26e-15 | 3 |
tunica intima | 2.26e-15 | 3 |
heart layer | 2.26e-15 | 3 |
endocardium | 2.26e-15 | 3 |
endocardial cushion | 2.26e-15 | 3 |
presumptive endocardium | 2.26e-15 | 3 |
cardiac chamber | 2.60e-15 | 3 |
mitral valve | 2.93e-12 | 1 |
left cardiac atrium | 3.27e-12 | 1 |
pulmonary valve | 4.53e-12 | 1 |
semi-lunar valve | 4.53e-12 | 1 |
heart left ventricle | 5.05e-12 | 1 |
cardiac ventricle | 5.05e-12 | 1 |
future cardiac ventricle | 5.05e-12 | 1 |
heart | 3.65e-11 | 24 |
primitive heart tube | 3.65e-11 | 24 |
primary heart field | 3.65e-11 | 24 |
anterior lateral plate mesoderm | 3.65e-11 | 24 |
heart tube | 3.65e-11 | 24 |
heart primordium | 3.65e-11 | 24 |
cardiac mesoderm | 3.65e-11 | 24 |
cardiogenic plate | 3.65e-11 | 24 |
heart rudiment | 3.65e-11 | 24 |
compound organ | 3.52e-09 | 68 |
blood vessel layer | 4.33e-07 | 7 |
atrioventricular valve | 9.44e-07 | 2 |
cardiac atrium | 9.96e-07 | 2 |
future cardiac atrium | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.66e-22 | 2 |
vascular disease | 4.06e-12 | 1 |
ischemia | 4.06e-12 | 1 |
extrinsic cardiomyopathy | 4.06e-12 | 1 |
myocardial ischemia | 4.06e-12 | 1 |
myocardial infarction | 4.06e-12 | 1 |
genetic disease | 5.62e-12 | 1 |
monogenic disease | 5.62e-12 | 1 |
xeroderma pigmentosum | 5.62e-12 | 1 |
acute leukemia | 9.61e-12 | 1 |
cardiovascular system disease | 9.63e-12 | 4 |