FFCP PHASE1:Hg19::chr22:19939035..19939049,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1312 | |EntrezGene=1312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |HGNC=2228 | ||
|TSSclassifier=strong | |||
|UniProt=P21964 | |UniProt=P21964 | ||
|association_with_transcript=0bp_to_NM_001135162,uc002zqx.2_5end | |association_with_transcript=0bp_to_NM_001135162,uc002zqx.2_5end | ||
|cluster_id=chr22:19939035..19939049,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_21_at_COMT_5end | |description=CAGE_peak_21_at_COMT_5end | ||
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|ontology_enrichment_celltype=CL:0000147!2.18e-24!14;CL:0000148!5.43e-15!10;CL:0000541!5.43e-15!10;CL:0000149!3.54e-12!4;CL:0002567!1.97e-10!3;CL:0000325!4.73e-10!39;CL:0002586!2.84e-09!3;CL:0000075!1.14e-07!27;CL:0000710!7.14e-07!20 | |ontology_enrichment_celltype=CL:0000147!2.18e-24!14;CL:0000148!5.43e-15!10;CL:0000541!5.43e-15!10;CL:0000149!3.54e-12!4;CL:0002567!1.97e-10!3;CL:0000325!4.73e-10!39;CL:0002586!2.84e-09!3;CL:0000075!1.14e-07!27;CL:0000710!7.14e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.40e-74;10!CL:0000147;3.08e-53;14!CL:0002567;7.56e-47;3!CL:0000710;3.29e-37;20!CL:0000075;1.13e-35;27!CL:0002077;2.99e-19;34!CL:0002566;1.31e-16;1 | |ontology_enrichment_celltype_v019=CL:0000148;1.40e-74;10!CL:0000147;3.08e-53;14!CL:0002567;7.56e-47;3!CL:0000710;3.29e-37;20!CL:0000075;1.13e-35;27!CL:0002077;2.99e-19;34!CL:0002566;1.31e-16;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.40e-74,10;CL:0000541,1.40e-74,10;CL:0000147,3.08e-53,14;CL:0002567,7.56e-47,3;CL:0000710,3.29e-37,20;CL:0000075,1.16e-35,27;CL:0002077,9.06e-22,34;CL:0000333,3.89e-17,41;CL:0002566,1.21e-16,1;CL:0000133,5.90e-12,59;CL:0000221,9.00e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000133;8.45e-07;59 | |ontology_enrichment_development_v019=CL:0000133;8.45e-07;59 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;3.71e-09;2 | |ontology_enrichment_disease_v019=DOID:1909;3.71e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,3.71e-09,2 | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p21@COMT | |short_description=p21@COMT | ||
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Latest revision as of 04:03, 19 September 2015
Short description: | p21@COMT |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_COMT_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 0bp_to_NM_001135162, uc002zqx.2_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | P21964 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.40e-74 | 10 |
melanoblast | 1.40e-74 | 10 |
pigment cell | 3.08e-53 | 14 |
light melanocyte | 7.56e-47 | 3 |
neurecto-epithelial cell | 3.29e-37 | 20 |
columnar/cuboidal epithelial cell | 1.16e-35 | 27 |
ecto-epithelial cell | 9.06e-22 | 34 |
migratory neural crest cell | 3.89e-17 | 41 |
dark melanocyte | 1.21e-16 | 1 |
neurectodermal cell | 5.90e-12 | 59 |
ectodermal cell | 9.00e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.71e-09 | 2 |