FFCP PHASE1:Hg19::chr8:80963673..80963679,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7163 | |EntrezGene=7163 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12005 | |HGNC=12005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000523395_5end | |association_with_transcript=-22bp_to_ENST00000523395_5end | ||
|cluster_id=chr8:80963673..80963679,- | |||
|coexpression_cluster_id=C285 | |coexpression_cluster_id=C285 | ||
|description=CAGE_peak_29_at_TPD52_5end | |description=CAGE_peak_29_at_TPD52_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:12603!7.18e-09!1 | |ontology_enrichment_disease=DOID:12603!7.18e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:4362;1.40e-14;5 | |ontology_enrichment_disease_v019=DOID:4362;1.40e-14;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,1.40e-14,5 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001954,5.04e-34,2;UBERON:0003022,5.04e-34,2;UBERON:0002421,5.04e-34,2;UBERON:0002600,5.04e-34,2;UBERON:0000349,1.60e-14,5;UBERON:0002021,1.83e-14,5;UBERON:0002619,1.41e-12,22;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0000956,2.91e-11,25;UBERON:0000203,2.91e-11,25;UBERON:0002791,4.11e-09,32;UBERON:0001869,4.11e-09,32;UBERON:0003528,1.18e-08,34;UBERON:0002020,1.18e-08,34;UBERON:0001893,1.18e-08,34;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41 | |||
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|short_description=p29@TPD52 | |short_description=p29@TPD52 | ||
}} | }} |
Latest revision as of 04:26, 19 September 2015
Short description: | p29@TPD52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_TPD52_5end |
Coexpression cluster: | C285_cervical_Hep2_small_colon_temporal_duodenum_bronchogenic |
Association with transcript: | -22bp_to_ENST00000523395_5end |
EntrezGene: | TPD52 |
HGNC: | 12005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 5.04e-34 | 2 |
lobe parts of cerebral cortex | 5.04e-34 | 2 |
hippocampal formation | 5.04e-34 | 2 |
limbic lobe | 5.04e-34 | 2 |
limbic system | 1.60e-14 | 5 |
occipital lobe | 1.83e-14 | 5 |
regional part of cerebral cortex | 1.41e-12 | 22 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
cerebral cortex | 2.91e-11 | 25 |
pallium | 2.91e-11 | 25 |
regional part of telencephalon | 4.11e-09 | 32 |
cerebral hemisphere | 4.11e-09 | 32 |
brain grey matter | 1.18e-08 | 34 |
gray matter | 1.18e-08 | 34 |
telencephalon | 1.18e-08 | 34 |
regional part of forebrain | 2.17e-07 | 41 |
forebrain | 2.17e-07 | 41 |
anterior neural tube | 2.17e-07 | 41 |
future forebrain | 2.17e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.40e-14 | 5 |