FFCP PHASE1:Hg19::chr7:107301264..107301278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5172 | |EntrezGene=5172 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8818 | |HGNC=8818 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQG1 | |UniProt=C9JQG1 | ||
|association_with_transcript=-170bp_to_ENST00000440056_5end | |association_with_transcript=-170bp_to_ENST00000440056_5end | ||
|cluster_id=chr7:107301264..107301278,+ | |||
|coexpression_cluster_id=C30 | |coexpression_cluster_id=C30 | ||
|description=CAGE_peak_1_at_SLC26A4_5end | |description=CAGE_peak_1_at_SLC26A4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.61e-14;5!UBERON:0009847;9.91e-07;3!UBERON:0003353;9.91e-07;3 | |ontology_enrichment_development_v019=UBERON:0007123;1.61e-14;5!UBERON:0009847;9.91e-07;3!UBERON:0003353;9.91e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000341;3.94e-34;2!UBERON:0002046;1.61e-14;5!UBERON:0000974;4.42e-12;6!UBERON:0003127;1.12e-09;2!UBERON:0002114;9.91e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000341;3.94e-34;2!UBERON:0002046;1.61e-14;5!UBERON:0000974;4.42e-12;6!UBERON:0003127;1.12e-09;2!UBERON:0002114;9.91e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,3.62e-34,2;UBERON:0002046,1.61e-14,5;UBERON:0004117,1.61e-14,5;UBERON:0007689,1.61e-14,5;UBERON:0007123,1.61e-14,5;UBERON:0003091,1.61e-14,5;UBERON:0003127,1.12e-09,2;UBERON:0000974,1.29e-07,10;UBERON:0009722,4.30e-07,11;UBERON:0007690,4.30e-07,11;UBERON:0002114,9.64e-07,2 | |||
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| ||
|short_description=p1@SLC26A4 | |short_description=p1@SLC26A4 | ||
}} | }} |
Latest revision as of 01:40, 25 September 2015
Short description: | p1@SLC26A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC26A4_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | -170bp_to_ENST00000440056_5end |
EntrezGene: | SLC26A4 |
HGNC: | 8818 |
UniProt: | C9JQG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 3.62e-34 | 2 |
thyroid gland | 1.61e-14 | 5 |
pharyngeal pouch | 1.61e-14 | 5 |
thyroid diverticulum | 1.61e-14 | 5 |
pharyngeal pouch 2 | 1.61e-14 | 5 |
thyroid primordium | 1.61e-14 | 5 |
open tracheal system trachea | 1.12e-09 | 2 |
neck | 1.29e-07 | 10 |
entire pharyngeal arch endoderm | 4.30e-07 | 11 |
early pharyngeal endoderm | 4.30e-07 | 11 |
duodenum | 9.64e-07 | 2 |