FFCP PHASE1:Hg19::chr9:12693574..12693586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt=Q6LES1 | |UniProt=Q6LES1 | ||
|association_with_transcript=-410bp_to_CR407683_5end | |association_with_transcript=-410bp_to_CR407683_5end | ||
|cluster_id=chr9:12693574..12693586,+ | |||
|coexpression_cluster_id=C348 | |coexpression_cluster_id=C348 | ||
|description=CAGE_peak_4_at_TYRP1_5end | |description=CAGE_peak_4_at_TYRP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!3.54e-48!10;CL:0000541!3.54e-48!10;CL:0000147!2.12e-46!14;CL:0000710!4.98e-24!20;CL:0002567!6.06e-19!3;CL:0000075!9.59e-18!27;CL:0000325!2.17e-16!39;CL:0002566!4.73e-15!1;CL:0002077!1.80e-14!33;CL:0000149!2.26e-14!4;CL:0000333!4.89e-11!41;CL:0000133!1.12e-07!59 | |ontology_enrichment_celltype=CL:0000148!3.54e-48!10;CL:0000541!3.54e-48!10;CL:0000147!2.12e-46!14;CL:0000710!4.98e-24!20;CL:0002567!6.06e-19!3;CL:0000075!9.59e-18!27;CL:0000325!2.17e-16!39;CL:0002566!4.73e-15!1;CL:0002077!1.80e-14!33;CL:0000149!2.26e-14!4;CL:0000333!4.89e-11!41;CL:0000133!1.12e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.05e-88;10!CL:0000147;1.65e-63;14!CL:0000710;1.36e-44;20!CL:0002567;7.70e-34;3!CL:0000075;3.96e-33;27!CL:0002566;2.16e-26;1!CL:0002077;1.10e-24;34!CL:0000149;1.40e-07;4 | |ontology_enrichment_celltype_v019=CL:0000148;1.05e-88;10!CL:0000147;1.65e-63;14!CL:0000710;1.36e-44;20!CL:0002567;7.70e-34;3!CL:0000075;3.96e-33;27!CL:0002566;2.16e-26;1!CL:0002077;1.10e-24;34!CL:0000149;1.40e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.05e-88,10;CL:0000541,1.05e-88,10;CL:0000147,1.65e-63,14;CL:0000710,1.36e-44,20;CL:0002567,7.70e-34,3;CL:0000075,3.96e-33,27;CL:0002566,2.16e-26,1;CL:0002077,2.26e-26,34;CL:0000333,6.58e-21,41;CL:0000133,8.53e-15,59;CL:0000221,3.22e-12,72;CL:0000149,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.67e-09;3!CL:0000133;3.04e-08;59!CL:0000221;5.53e-07;72 | |ontology_enrichment_development_v019=UBERON:0003056;1.67e-09;3!CL:0000133;3.04e-08;59!CL:0000221;5.53e-07;72 | ||
|ontology_enrichment_disease=DOID:1909!5.74e-08!2 | |ontology_enrichment_disease=DOID:1909!5.74e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.55e-13;2 | |ontology_enrichment_disease_v019=DOID:1909;1.55e-13;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.42e-11!5;UBERON:0005388!1.42e-11!5;UBERON:0001802!1.42e-11!5 | |ontology_enrichment_uberon=UBERON:0000966!1.42e-11!5;UBERON:0005388!1.42e-11!5;UBERON:0001802!1.42e-11!5 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@TYRP1 | |short_description=p4@TYRP1 | ||
}} | }} |
Latest revision as of 23:32, 24 September 2015
Short description: | p4@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TYRP1_5end |
Coexpression cluster: | C348_Melanocyte_melanoma_retina_cervical_eye_carcinoid_Basophils |
Association with transcript: | -410bp_to_CR407683_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | Q6LES1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.05e-88 | 10 |
melanoblast | 1.05e-88 | 10 |
pigment cell | 1.65e-63 | 14 |
neurecto-epithelial cell | 1.36e-44 | 20 |
light melanocyte | 7.70e-34 | 3 |
columnar/cuboidal epithelial cell | 3.96e-33 | 27 |
dark melanocyte | 2.16e-26 | 1 |
ecto-epithelial cell | 2.26e-26 | 34 |
migratory neural crest cell | 6.58e-21 | 41 |
neurectodermal cell | 8.53e-15 | 59 |
ectodermal cell | 3.22e-12 | 72 |
visual pigment cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.55e-13 | 2 |