FFCP PHASE1:Hg19::chr12:54379362..54379381,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_ENST00000514702_5end | |association_with_transcript=-59bp_to_ENST00000514702_5end | ||
|cluster_id=chr12:54379362..54379381,- | |||
|description=CAGE_peak_1_at_ENST00000514702_5end | |description=CAGE_peak_1_at_ENST00000514702_5end | ||
|id=chr12:54379362..54379381,- | |id=chr12:54379362..54379381,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000650;3.43e-10;2!CL:1000500;3.43e-10;2!CL:1000618;3.43e-10;2!CL:1001318;3.43e-10;2!CL:0002173;3.43e-10;2!CL:0000135;7.57e-07;3!CL:0000388;7.57e-07;3 | |ontology_enrichment_celltype_v019=CL:0000650;3.43e-10;2!CL:1000500;3.43e-10;2!CL:1000618;3.43e-10;2!CL:1001318;3.43e-10;2!CL:0002173;3.43e-10;2!CL:0000135;7.57e-07;3!CL:0000388;7.57e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000650,5.09e-10,2;CL:1000500,5.09e-10,2;CL:1000618,5.09e-10,2;CL:1001318,5.09e-10,2;CL:0002173,5.09e-10,2;CL:0000135,5.78e-07,3;CL:0000388,5.78e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.64e-15;29 | |ontology_enrichment_development_v019=UBERON:0008947;8.64e-15;29 | ||
|ontology_enrichment_disease=DOID:0050687!3.64e-15!143;DOID:305!1.24e-12!106;DOID:162!8.46e-09!235;DOID:14566!2.76e-08!239 | |ontology_enrichment_disease=DOID:0050687!3.64e-15!143;DOID:305!1.24e-12!106;DOID:162!8.46e-09!235;DOID:14566!2.76e-08!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,8.06e-12,106;DOID:0050687,6.75e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.10e-15!9;UBERON:0001557!4.79e-07!19 | |ontology_enrichment_uberon=UBERON:0001737!3.10e-15!9;UBERON:0001557!4.79e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.95e-42;9!UBERON:0001557;2.95e-42;9!UBERON:0000072;1.66e-10;37!UBERON:0003567;3.43e-10;2!UBERON:0003838;3.43e-10;2!UBERON:0003586;3.43e-10;2!UBERON:0005169;3.43e-10;2!UBERON:0002321;3.43e-10;2!UBERON:0005215;3.43e-10;2!UBERON:0002303;3.43e-10;2!UBERON:0002319;3.43e-10;2!UBERON:0000065;3.50e-09;44!UBERON:0007846;7.57e-07;3!UBERON:0000043;7.57e-07;3!UBERON:0007845;7.57e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.95e-42;9!UBERON:0001557;2.95e-42;9!UBERON:0000072;1.66e-10;37!UBERON:0003567;3.43e-10;2!UBERON:0003838;3.43e-10;2!UBERON:0003586;3.43e-10;2!UBERON:0005169;3.43e-10;2!UBERON:0002321;3.43e-10;2!UBERON:0005215;3.43e-10;2!UBERON:0002303;3.43e-10;2!UBERON:0002319;3.43e-10;2!UBERON:0000065;3.50e-09;44!UBERON:0007846;7.57e-07;3!UBERON:0000043;7.57e-07;3!UBERON:0007845;7.57e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.79e-42,9;UBERON:0001557,3.71e-19,19;UBERON:0008947,8.09e-11,38;UBERON:0003258,8.09e-11,38;UBERON:0003567,5.09e-10,2;UBERON:0003838,5.09e-10,2;UBERON:0003586,5.09e-10,2;UBERON:0005169,5.09e-10,2;UBERON:0002321,5.09e-10,2;UBERON:0005215,5.09e-10,2;UBERON:0002303,5.09e-10,2;UBERON:0002319,5.09e-10,2;UBERON:0000072,2.22e-08,47;UBERON:0000065,4.73e-07,54;UBERON:0007846,5.78e-07,3;UBERON:0000043,5.78e-07,3;UBERON:0007845,5.78e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.289693037921647,2.3858578411533,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.469737994575059,0.161872944368132,0,0,0,0,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0.772921620136887,0.744467425326359,0.337552664482532,0.974370051611986,0,0,0,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07597680103594,4.21461725195254,1.44606617930089,3.30881918197182,2.39667388501647,4.03360052488864,3.91010793664477,4.12065076763227,5.38646019724947,0,0,0,0,0,0,0,0,0,0,0,0,1.60846355858609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0.571652865261156,0,0,0,0.258543431515556,0,0,0,0,1.02882949704857,0,0.799266537048298,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,2.85273810081437,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.462629081407967,0,0.328508624055237,0,1.04589340613963,0.241718899183244,0,0,0,0,0,0,0.15403067420883,0,1.46139224653261,0.316654886678627,0,0,0,0,2.43851793789468,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0.574265537996172,1.30012049207304,0,0.290012154876366,0,0,0,0.322260734604821,1.0151168573996,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,1.42037263873893,0.6196469961995,0.281695602532241,0.286822704408103,0.294747123039363,1.07001315444375,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.293016358543788,0,0,0.852408440419239,0,0,0,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33505999976794,0,0,0,2.36387681767936,0,0.583209226766509,0.173624994933292,0,0,0,0,0,0,2.94133851501273,0.83654246567162,0,0,0,0.0897576444097721,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.0979923974143777,0,0.17472666824203,0,4.64430390187609,5.92023468398103,3.530964653288,0,0,0,0,0,0,1.56441106187842,0,0,0.39961921916426,0.576361668616424,0.687219576995494,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,2.32991899054908,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0.335434687599266,1.02447419488958,0.786818822024972,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0.468334905806882,1.01444720027578,0,0,0,0,0,2.66943366478961,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0,0,0,1.03018711554838,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0.11796972334774,0,0.231051332300676,0,0,0.994581110581374,0.225630985047772,0.20170506870352,0,0,0,0.591424344868181,0,0,0,0,0,0,0.496211178389294,0.703484977438482,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0.280272163313789,0,0.431855182437243,0,0,0,1.51113852978563,2.08629926763095,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,1.86485443868962,0,0.647428837187895,0.307988420568741,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,1.10440093535229,0,0,0,1.11598505450025,0,1.73050624849516,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.289693037921647,2.3858578411533,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.469737994575059,0.161872944368132,0,0,0,0,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0.772921620136887,0.744467425326359,0.337552664482532,0.974370051611986,0,0,0,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07597680103594,4.21461725195254,1.44606617930089,3.30881918197182,2.39667388501647,4.03360052488864,3.91010793664477,4.12065076763227,5.38646019724947,0,0,0,0,0,0,0,0,0,0,0,0,1.60846355858609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0.571652865261156,0,0,0,0.258543431515556,0,0,0,0,1.02882949704857,0,0.799266537048298,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,2.85273810081437,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.462629081407967,0,0.328508624055237,0,1.04589340613963,0.241718899183244,0,0,0,0,0,0,0.15403067420883,0,1.46139224653261,0.316654886678627,0,0,0,0,2.43851793789468,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0.574265537996172,1.30012049207304,0,0.290012154876366,0,0,0,0.322260734604821,1.0151168573996,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,1.42037263873893,0.6196469961995,0.281695602532241,0.286822704408103,0.294747123039363,1.07001315444375,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.293016358543788,0,0,0.852408440419239,0,0,0,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33505999976794,0,0,0,2.36387681767936,0,0.583209226766509,0.173624994933292,0,0,0,0,0,0,2.94133851501273,0.83654246567162,0,0,0,0.0897576444097721,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.0979923974143777,0,0.17472666824203,0,4.64430390187609,5.92023468398103,3.530964653288,0,0,0,0,0,0,1.56441106187842,0,0,0.39961921916426,0.576361668616424,0.687219576995494,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,2.32991899054908,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0.335434687599266,1.02447419488958,0.786818822024972,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0.468334905806882,1.01444720027578,0,0,0,0,0,2.66943366478961,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0,0,0,1.03018711554838,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0.11796972334774,0,0.231051332300676,0,0,0.994581110581374,0.225630985047772,0.20170506870352,0,0,0,0.591424344868181,0,0,0,0,0,0,0.496211178389294,0.703484977438482,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0.280272163313789,0,0.431855182437243,0,0,0,1.51113852978563,2.08629926763095,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,1.86485443868962,0,0.647428837187895,0.307988420568741,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,1.10440093535229,0,0,0,1.11598505450025,0,1.73050624849516,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p1@ENST00000514702 | |short_description=p1@ENST00000514702 | ||
}} | }} |
Latest revision as of 09:56, 24 July 2015
Short description: | p1@ENST00000514702 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000514702_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENST00000514702_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 5.09e-10 | 2 |
kidney interstitial cell | 5.09e-10 | 2 |
juxtaglomerular complex cell | 5.09e-10 | 2 |
renal interstitial pericyte | 5.09e-10 | 2 |
extraglomerular mesangial cell | 5.09e-10 | 2 |
fibrocyte | 5.78e-07 | 3 |
tendon cell | 5.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.79e-42 | 9 |
upper respiratory tract | 3.71e-19 | 19 |
respiratory primordium | 8.09e-11 | 38 |
endoderm of foregut | 8.09e-11 | 38 |
abdomen connective tissue | 5.09e-10 | 2 |
abdominal segment connective tissue | 5.09e-10 | 2 |
trunk connective tissue | 5.09e-10 | 2 |
interstitial tissue | 5.09e-10 | 2 |
extraglomerular mesangium | 5.09e-10 | 2 |
kidney interstitium | 5.09e-10 | 2 |
juxtaglomerular apparatus | 5.09e-10 | 2 |
mesangium | 5.09e-10 | 2 |
segment of respiratory tract | 2.22e-08 | 47 |
respiratory tract | 4.73e-07 | 54 |
dense regular connective tissue | 5.78e-07 | 3 |
tendon | 5.78e-07 | 3 |
regular connective tissue | 5.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.06e-12 | 106 |
cell type cancer | 6.75e-11 | 143 |