FFCP PHASE1:Hg19::chr18:5197269..5197276,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=642597 | |EntrezGene=642597 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28285 | |HGNC=28285 | ||
|TSSclassifier=strong | |||
|UniProt=P0CW23 | |UniProt=P0CW23 | ||
|association_with_transcript=-14bp_to_ENST00000434239,NM_001145194,uc010wzc.1_5end | |association_with_transcript=-14bp_to_ENST00000434239,NM_001145194,uc010wzc.1_5end | ||
|cluster_id=chr18:5197269..5197276,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_7_at_C18orf42_5end | |description=CAGE_peak_7_at_C18orf42_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.20e-51!57;UBERON:0005068!5.20e-51!57;UBERON:0006241!5.20e-51!57;UBERON:0007135!5.20e-51!57;UBERON:0002616!5.56e-44!59;UBERON:0001017!2.12e-42!82;UBERON:0000955!4.36e-41!69;UBERON:0006238!4.36e-41!69;UBERON:0005743!2.47e-40!86;UBERON:0003075!7.37e-37!86;UBERON:0007284!7.37e-37!86;UBERON:0003076!1.82e-36!15;UBERON:0003057!1.82e-36!15;UBERON:0000073!2.63e-36!94;UBERON:0001016!2.63e-36!94;UBERON:0004733!3.07e-35!12;UBERON:0002028!3.07e-35!12;UBERON:0007277!3.07e-35!12;UBERON:0002346!4.18e-35!90;UBERON:0004732!1.75e-32!13;UBERON:0007023!4.51e-30!115;UBERON:0002680!1.11e-24!9;UBERON:0001895!1.11e-24!9;UBERON:0010092!1.11e-24!9;UBERON:0000033!1.16e-24!123;UBERON:0000153!2.17e-23!129;UBERON:0007811!2.17e-23!129;UBERON:0002780!3.99e-23!41;UBERON:0001890!3.99e-23!41;UBERON:0006240!3.99e-23!41;UBERON:0002619!6.07e-23!22;UBERON:0003080!1.51e-22!42;UBERON:0004121!3.25e-21!169;UBERON:0000924!1.17e-20!173;UBERON:0006601!1.17e-20!173;UBERON:0000956!3.46e-20!25;UBERON:0000203!3.46e-20!25;UBERON:0001950!2.12e-19!20;UBERON:0002791!3.63e-19!33;UBERON:0002020!1.05e-18!34;UBERON:0003528!1.05e-18!34;UBERON:0001893!1.39e-18!34;UBERON:0002298!1.56e-17!8;UBERON:0001872!3.19e-16!5;UBERON:0001869!1.06e-15!32;UBERON:0003056!4.15e-15!61;UBERON:0002037!3.03e-14!6;UBERON:0006215!3.03e-14!6;UBERON:0000025!5.03e-13!194;UBERON:0000988!1.41e-12!3;UBERON:0001896!1.89e-12!3;UBERON:0005290!1.89e-12!3;UBERON:0010096!1.89e-12!3;UBERON:0002581!4.44e-10!1;UBERON:0003112!5.30e-10!1;UBERON:0000032!5.30e-10!1;UBERON:0005253!5.30e-10!1;UBERON:0003128!5.30e-10!1;UBERON:0002241!5.30e-10!1;UBERON:0001703!5.30e-10!1;UBERON:0004761!5.30e-10!1;UBERON:0009617!5.30e-10!1;UBERON:0004111!7.17e-10!241;UBERON:0002902!8.24e-10!1;UBERON:0009899!8.24e-10!1;UBERON:0002336!9.82e-10!1;UBERON:0001018!9.82e-10!1;UBERON:0002473!9.82e-10!1;UBERON:0005340!9.82e-10!1;UBERON:0002316!9.82e-10!1;UBERON:0003544!9.82e-10!1;UBERON:0001020!9.82e-10!1;UBERON:0005970!9.82e-10!1;UBERON:0002437!9.82e-10!1;UBERON:0000483!4.26e-09!309;UBERON:0000119!5.63e-09!312;UBERON:0000477!6.55e-09!286;UBERON:0000475!4.16e-08!365;UBERON:0002021!8.04e-08!5 | |ontology_enrichment_uberon=UBERON:0001049!5.20e-51!57;UBERON:0005068!5.20e-51!57;UBERON:0006241!5.20e-51!57;UBERON:0007135!5.20e-51!57;UBERON:0002616!5.56e-44!59;UBERON:0001017!2.12e-42!82;UBERON:0000955!4.36e-41!69;UBERON:0006238!4.36e-41!69;UBERON:0005743!2.47e-40!86;UBERON:0003075!7.37e-37!86;UBERON:0007284!7.37e-37!86;UBERON:0003076!1.82e-36!15;UBERON:0003057!1.82e-36!15;UBERON:0000073!2.63e-36!94;UBERON:0001016!2.63e-36!94;UBERON:0004733!3.07e-35!12;UBERON:0002028!3.07e-35!12;UBERON:0007277!3.07e-35!12;UBERON:0002346!4.18e-35!90;UBERON:0004732!1.75e-32!13;UBERON:0007023!4.51e-30!115;UBERON:0002680!1.11e-24!9;UBERON:0001895!1.11e-24!9;UBERON:0010092!1.11e-24!9;UBERON:0000033!1.16e-24!123;UBERON:0000153!2.17e-23!129;UBERON:0007811!2.17e-23!129;UBERON:0002780!3.99e-23!41;UBERON:0001890!3.99e-23!41;UBERON:0006240!3.99e-23!41;UBERON:0002619!6.07e-23!22;UBERON:0003080!1.51e-22!42;UBERON:0004121!3.25e-21!169;UBERON:0000924!1.17e-20!173;UBERON:0006601!1.17e-20!173;UBERON:0000956!3.46e-20!25;UBERON:0000203!3.46e-20!25;UBERON:0001950!2.12e-19!20;UBERON:0002791!3.63e-19!33;UBERON:0002020!1.05e-18!34;UBERON:0003528!1.05e-18!34;UBERON:0001893!1.39e-18!34;UBERON:0002298!1.56e-17!8;UBERON:0001872!3.19e-16!5;UBERON:0001869!1.06e-15!32;UBERON:0003056!4.15e-15!61;UBERON:0002037!3.03e-14!6;UBERON:0006215!3.03e-14!6;UBERON:0000025!5.03e-13!194;UBERON:0000988!1.41e-12!3;UBERON:0001896!1.89e-12!3;UBERON:0005290!1.89e-12!3;UBERON:0010096!1.89e-12!3;UBERON:0002581!4.44e-10!1;UBERON:0003112!5.30e-10!1;UBERON:0000032!5.30e-10!1;UBERON:0005253!5.30e-10!1;UBERON:0003128!5.30e-10!1;UBERON:0002241!5.30e-10!1;UBERON:0001703!5.30e-10!1;UBERON:0004761!5.30e-10!1;UBERON:0009617!5.30e-10!1;UBERON:0004111!7.17e-10!241;UBERON:0002902!8.24e-10!1;UBERON:0009899!8.24e-10!1;UBERON:0002336!9.82e-10!1;UBERON:0001018!9.82e-10!1;UBERON:0002473!9.82e-10!1;UBERON:0005340!9.82e-10!1;UBERON:0002316!9.82e-10!1;UBERON:0003544!9.82e-10!1;UBERON:0001020!9.82e-10!1;UBERON:0005970!9.82e-10!1;UBERON:0002437!9.82e-10!1;UBERON:0000483!4.26e-09!309;UBERON:0000119!5.63e-09!312;UBERON:0000477!6.55e-09!286;UBERON:0000475!4.16e-08!365;UBERON:0002021!8.04e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.26e-09;53!UBERON:0002616;8.26e-09;53!UBERON:0001016;9.28e-08;83!UBERON:0000955;1.68e-07;68!UBERON:0001017;8.51e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.26e-09;53!UBERON:0002616;8.26e-09;53!UBERON:0001016;9.28e-08;83!UBERON:0000955;1.68e-07;68!UBERON:0001017;8.51e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,4.42317039724898,2.06883333267483,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,4.42317039724898,2.06883333267483,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@C18orf42 | |short_description=p7@C18orf42 | ||
}} | }} |
Latest revision as of 19:52, 19 September 2015
Short description: | p7@C18orf42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_C18orf42_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -14bp_to_ENST00000434239, NM_001145194, uc010wzc.1_5end |
EntrezGene: | C18orf42 |
HGNC: | 28285 |
UniProt: | P0CW23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |