FFCP PHASE1:Hg19::chr6:91006575..91006602,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60468 | |EntrezGene=60468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14078 | |HGNC=14078 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYV9 | |UniProt=Q9BYV9 | ||
|association_with_transcript=-13bp_to_NM_021813,uc003pnw.2,uc010kch.2,uc011eab.1_5end | |association_with_transcript=-13bp_to_NM_021813,uc003pnw.2,uc010kch.2,uc011eab.1_5end | ||
|cluster_id=chr6:91006575..91006602,- | |||
|coexpression_cluster_id=C179 | |coexpression_cluster_id=C179 | ||
|description=CAGE_peak_2_at_BACH2_5end | |description=CAGE_peak_2_at_BACH2_5end | ||
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|ontology_enrichment_celltype=CL:0000542!1.12e-11!53;CL:0000051!1.12e-11!53;CL:0000838!2.18e-11!52;CL:0000791!1.96e-09!18;CL:0000789!1.96e-09!18;CL:0002420!1.96e-09!18;CL:0002419!1.96e-09!18;CL:0000790!1.96e-09!18;CL:0000236!5.12e-09!14;CL:0000738!3.58e-07!140;CL:0000625!5.56e-07!11 | |ontology_enrichment_celltype=CL:0000542!1.12e-11!53;CL:0000051!1.12e-11!53;CL:0000838!2.18e-11!52;CL:0000791!1.96e-09!18;CL:0000789!1.96e-09!18;CL:0002420!1.96e-09!18;CL:0002419!1.96e-09!18;CL:0000790!1.96e-09!18;CL:0000236!5.12e-09!14;CL:0000738!3.58e-07!140;CL:0000625!5.56e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.71e-13;13!CL:0000791;6.16e-12;18!CL:0000789;6.16e-12;18!CL:0002419;6.16e-12;18!CL:0000542;2.44e-11;53!CL:0000625;1.96e-08;11!CL:0000945;2.67e-08;24!CL:0000084;5.11e-08;25 | |ontology_enrichment_celltype_v019=CL:0000236;7.71e-13;13!CL:0000791;6.16e-12;18!CL:0000789;6.16e-12;18!CL:0002419;6.16e-12;18!CL:0000542;2.44e-11;53!CL:0000625;1.96e-08;11!CL:0000945;2.67e-08;24!CL:0000084;5.11e-08;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.98e-17,53;CL:0000051,3.98e-17,53;CL:0000838,9.48e-17,52;CL:0000791,6.52e-12,18;CL:0000789,6.52e-12,18;CL:0002420,6.52e-12,18;CL:0002419,6.52e-12,18;CL:0000790,6.52e-12,18;CL:0000236,2.00e-11,14;CL:0000738,3.51e-10,136;CL:0002087,9.13e-09,115;CL:0000625,2.02e-08,11;CL:0000945,3.00e-08,24;CL:0000826,3.00e-08,24;CL:0000084,7.16e-08,25;CL:0000827,7.16e-08,25;CL:0002031,6.24e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;6.16e-12;18!CL:0000051;2.44e-11;53 | |ontology_enrichment_development_v019=CL:0000790;6.16e-12;18!CL:0000051;2.44e-11;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-25!115;UBERON:0001017!2.05e-16!82;UBERON:0001049!2.62e-16!57;UBERON:0005068!2.62e-16!57;UBERON:0006241!2.62e-16!57;UBERON:0007135!2.62e-16!57;UBERON:0005743!7.32e-16!86;UBERON:0000073!4.09e-15!94;UBERON:0001016!4.09e-15!94;UBERON:0002616!4.94e-13!59;UBERON:0000955!5.68e-13!69;UBERON:0006238!5.68e-13!69;UBERON:0003080!1.29e-11!42;UBERON:0002780!1.59e-11!41;UBERON:0001890!1.59e-11!41;UBERON:0006240!1.59e-11!41;UBERON:0002020!5.75e-10!34;UBERON:0003528!5.75e-10!34;UBERON:0003075!5.75e-10!86;UBERON:0007284!5.75e-10!86;UBERON:0001893!8.69e-10!34;UBERON:0002791!1.24e-09!33;UBERON:0002346!3.05e-09!90;UBERON:0001869!3.59e-09!32;UBERON:0000153!6.52e-09!129;UBERON:0007811!6.52e-09!129;UBERON:0000178!1.37e-08!15;UBERON:0000179!1.37e-08!15;UBERON:0000463!1.37e-08!15;UBERON:0000033!1.06e-07!123;UBERON:0004121!1.96e-07!169;UBERON:0000956!2.18e-07!25;UBERON:0000203!2.18e-07!25;UBERON:0003056!3.05e-07!61;UBERON:0000924!4.50e-07!173;UBERON:0006601!4.50e-07!173;UBERON:0002619!4.86e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!1.49e-25!115;UBERON:0001017!2.05e-16!82;UBERON:0001049!2.62e-16!57;UBERON:0005068!2.62e-16!57;UBERON:0006241!2.62e-16!57;UBERON:0007135!2.62e-16!57;UBERON:0005743!7.32e-16!86;UBERON:0000073!4.09e-15!94;UBERON:0001016!4.09e-15!94;UBERON:0002616!4.94e-13!59;UBERON:0000955!5.68e-13!69;UBERON:0006238!5.68e-13!69;UBERON:0003080!1.29e-11!42;UBERON:0002780!1.59e-11!41;UBERON:0001890!1.59e-11!41;UBERON:0006240!1.59e-11!41;UBERON:0002020!5.75e-10!34;UBERON:0003528!5.75e-10!34;UBERON:0003075!5.75e-10!86;UBERON:0007284!5.75e-10!86;UBERON:0001893!8.69e-10!34;UBERON:0002791!1.24e-09!33;UBERON:0002346!3.05e-09!90;UBERON:0001869!3.59e-09!32;UBERON:0000153!6.52e-09!129;UBERON:0007811!6.52e-09!129;UBERON:0000178!1.37e-08!15;UBERON:0000179!1.37e-08!15;UBERON:0000463!1.37e-08!15;UBERON:0000033!1.06e-07!123;UBERON:0004121!1.96e-07!169;UBERON:0000956!2.18e-07!25;UBERON:0000203!2.18e-07!25;UBERON:0003056!3.05e-07!61;UBERON:0000924!4.50e-07!173;UBERON:0006601!4.50e-07!173;UBERON:0002619!4.86e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.49e-10;15!UBERON:0000179;2.49e-10;15!UBERON:0000463;2.49e-10;15!UBERON:0002780;1.76e-09;41!UBERON:0001890;1.76e-09;41!UBERON:0003528;2.24e-09;34!UBERON:0002020;2.24e-09;34!UBERON:0000073;2.49e-09;53!UBERON:0002616;2.49e-09;53!UBERON:0002791;3.03e-09;32!UBERON:0001893;3.85e-09;34!UBERON:0000922;4.04e-09;49!UBERON:0001869;4.60e-09;32!UBERON:0002390;1.34e-08;32!UBERON:0000956;7.11e-08;25!UBERON:0000203;7.11e-08;25!UBERON:0007023;1.86e-07;114!UBERON:0002619;2.51e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.49e-10;15!UBERON:0000179;2.49e-10;15!UBERON:0000463;2.49e-10;15!UBERON:0002780;1.76e-09;41!UBERON:0001890;1.76e-09;41!UBERON:0003528;2.24e-09;34!UBERON:0002020;2.24e-09;34!UBERON:0000073;2.49e-09;53!UBERON:0002616;2.49e-09;53!UBERON:0002791;3.03e-09;32!UBERON:0001893;3.85e-09;34!UBERON:0000922;4.04e-09;49!UBERON:0001869;4.60e-09;32!UBERON:0002390;1.34e-08;32!UBERON:0000956;7.11e-08;25!UBERON:0000203;7.11e-08;25!UBERON:0007023;1.86e-07;114!UBERON:0002619;2.51e-07;22 | ||
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|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.984968464614303,2.04000691244253,2.82109249330279,1.43117993565528,1.36874425072884,2.13422487311165,0,0,0,8.26064981382698,2.30297638858328,3.8704030829019,0,0,0,119.609357695986,75.7762009157957,4.40400659002271,7.20194031091441,10.8294001633877,6.72733699219141,0,0.971680998056939,0.257575567634187,0.436194716338694,1.88937971844405,0.485168122375632,1.16214518452842,1.6446715520873,0.619412741790207,0,0.768482119587302,0,1.72372840368309,2.5819387343353,1.35426486594342,0.376484679085209,2.18324920046277,0.674170453335254,1.83650335422542,1.92557416245656,1.27867425159808,0,1.19678194572979,0.426224750532694,1.45104619314292,0.56738522469114,1.24564449799115,0.75374599577023,3.12889751052121,0.434377689410233,1.81619850790011,0,1.26584954976354,0.845021145247767,0.212604299965044,0,0.22465726229299,0.150176892841506,0.16072558669708,0.570025487482497,0,0.182664153764634,38.719173781491,77.5516827992227,56.9285922472675,62.3026124947101,67.2665258220501,77.0168269539007,75.3591154974743,68.6918703265462,211.747224508715,135.651790744687,163.230668409473,13.2171328579026,10.6496626966492,6.847986204152,33.2439511492378,32.2268825454315,24.4665783809416,1.83905144929746,28.681159463756,29.3537639555535,27.2757419771076,1.22551502573691,9.72199494666963,11.5197625183483,8.12411591295047,0.768547918354051,0.650296737799391,5.09757504271396,4.14525026678773,3.47763702882063,52.0485836698832,69.8281561314151,57.4945380927372,1.24640276967323,17.2449222120865,17.5249997196141,11.1328664488581,6.68987370080603,7.1619179924206,10.4549724889321,7.07703059665532,5.11946444617674,4.99722906209383,5.44587679701239,7.39015197228942,16.3301462012033,13.9068901807424,30.5579492192706,0,0.670700859703636,0,0,0,0.144846518960824,0,0,1.60709189178915,1.33037638477538,1.40535657109002,2.5540919722054,0,0,0.324547393654683,0.348259474598534,0,6.20075623193889,3.43196946468077,1.85728750664782,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0.516833518338658,0,0.33472061276467,0.402829317109147,0,1.22031028774085,0,0,0.446498641420399,0.44905874525234,0.675668882899933,0,0,0.916008719652036,7.9068250461638,7.75560528296651,0,0,0,0,0.860509862246441,1.77334191099179,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0.491337269247072,0.413303124703062,0,0.247266929278557,0,0,0.673344455816265,0.625592599359821,0,0,0,0.45071417671979,0,0.179389635688862,0.640672166455702,0,0,0,0,0,0,0,0,0,0,0.710019185033229,0,0,0.386521706326594,0.545492241181669,2.00763216772303,1.95157929807353,1.45782745153634,1.2781333715647,2.90250954043037,1.26160425437814,1.45990943630332,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,1.47008711385542,2.53510069643662,3.9313088667105,8.27105869353966,8.38779888887836,0,0.171567810298526,0.329250856225877,1.1240175325762,0,0.925884451585296,0,0,0,1.62302566965108,0.469634776943287,0.721832238805369,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0.839910640994298,0.567100388969546,0.0895585227028483,0,0.383382679165211,0,0,1.65862492432618,0.288239906833923,0.50496973370552,0.571481048629521,0.381988425558278,0,0,0.308482478109971,0,0.857479297891735,0.336393253036082,0.87192013766656,0.07333828582095,1.42198887333556,0,0,0,0,0.514414748524284,1.41849132023278,0,0,0,0,0,1.06617584622764,0.791951872933429,0,0,0.699810938274399,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0,18.914952979385,15.7408129647448,17.5829959703255,1.01637849688985,15.6167824629146,3.86644406388848,7.53823194004569,7.01732626818479,0,0,1.65766205374414,0.36807447515742,1.00034104211935,0,0,0,0,0.234282829985426,0.902838299183157,0,3.10419213877515,1.32845119707087,0.737476674166813,0,0.979005787313703,0.686286847621712,19.6429624816743,27.8271319056016,23.2666076011509,0.909382714338778,1.66435439510497,0,0.248107807818777,0.306923946576125,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0.40101294060657,0.736647911487171,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,1.46139224653261,0.844413031143006,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.656029291399411,0.976135183992909,1.854738209659,0.457847324091717,0.082509499920588,0,0.650060246036521,0,0.48335359146061,1.07834031980251,0.307007349452259,0.275673144969061,1.07420244868274,1.59518363305651,0.767039646744908,0.534192213880424,0.330569830721956,0.192190067365106,1.40373983744043,0.6069466851333,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0,0.190630193923825,0.255897791311334,1.71175595213568,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695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| ||
|short_description=p2@BACH2 | |short_description=p2@BACH2 | ||
}} | }} |
Latest revision as of 04:21, 20 September 2015
Short description: | p2@BACH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BACH2_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -13bp_to_NM_021813, uc003pnw.2, uc010kch.2, uc011eab.1_5end |
EntrezGene: | BACH2 |
HGNC: | 14078 |
UniProt: | Q9BYV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.98e-17 | 53 |
common lymphoid progenitor | 3.98e-17 | 53 |
lymphoid lineage restricted progenitor cell | 9.48e-17 | 52 |
mature alpha-beta T cell | 6.52e-12 | 18 |
alpha-beta T cell | 6.52e-12 | 18 |
immature T cell | 6.52e-12 | 18 |
mature T cell | 6.52e-12 | 18 |
immature alpha-beta T cell | 6.52e-12 | 18 |
B cell | 2.00e-11 | 14 |
leukocyte | 3.51e-10 | 136 |
nongranular leukocyte | 9.13e-09 | 115 |
CD8-positive, alpha-beta T cell | 2.02e-08 | 11 |
lymphocyte of B lineage | 3.00e-08 | 24 |
pro-B cell | 3.00e-08 | 24 |
T cell | 7.16e-08 | 25 |
pro-T cell | 7.16e-08 | 25 |
hematopoietic lineage restricted progenitor cell | 6.24e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.14e-28 | 114 |
neural tube | 1.21e-17 | 56 |
neural rod | 1.21e-17 | 56 |
future spinal cord | 1.21e-17 | 56 |
neural keel | 1.21e-17 | 56 |
central nervous system | 6.47e-17 | 81 |
regional part of nervous system | 2.48e-16 | 53 |
regional part of brain | 2.48e-16 | 53 |
nervous system | 4.14e-16 | 89 |
brain | 3.19e-13 | 68 |
future brain | 3.19e-13 | 68 |
neural plate | 1.58e-12 | 82 |
presumptive neural plate | 1.58e-12 | 82 |
regional part of forebrain | 1.91e-12 | 41 |
forebrain | 1.91e-12 | 41 |
anterior neural tube | 1.91e-12 | 41 |
future forebrain | 1.91e-12 | 41 |
neurectoderm | 1.52e-11 | 86 |
brain grey matter | 5.86e-11 | 34 |
gray matter | 5.86e-11 | 34 |
telencephalon | 9.57e-11 | 34 |
blood | 1.90e-10 | 15 |
haemolymphatic fluid | 1.90e-10 | 15 |
organism substance | 1.90e-10 | 15 |
regional part of telencephalon | 3.71e-10 | 32 |
cerebral hemisphere | 5.55e-10 | 32 |
organ system subdivision | 1.12e-08 | 223 |
pre-chordal neural plate | 4.27e-08 | 61 |
ecto-epithelium | 6.56e-08 | 104 |
cerebral cortex | 9.30e-08 | 25 |
pallium | 9.30e-08 | 25 |
regional part of cerebral cortex | 2.75e-07 | 22 |