FFCP PHASE1:Hg19::chr6:31790025..31790063,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:31790025..31790063,+ | |||
|coexpression_cluster_id=C646 | |coexpression_cluster_id=C646 | ||
|description=CAGE_peak_at_chr6:31790025..31790063,+ | |description=CAGE_peak_at_chr6:31790025..31790063,+ | ||
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|ontology_enrichment_celltype=CL:0000839!3.58e-19!70;CL:0000860!4.35e-18!45;CL:0002057!1.19e-17!42;CL:0000557!1.90e-17!71;CL:0000766!1.44e-16!76;CL:0002009!6.46e-15!65;CL:0002194!6.62e-15!63;CL:0000576!6.62e-15!63;CL:0000040!6.62e-15!63;CL:0000559!6.62e-15!63;CL:0000763!2.34e-14!112;CL:0000049!2.34e-14!112 | |ontology_enrichment_celltype=CL:0000839!3.58e-19!70;CL:0000860!4.35e-18!45;CL:0002057!1.19e-17!42;CL:0000557!1.90e-17!71;CL:0000766!1.44e-16!76;CL:0002009!6.46e-15!65;CL:0002194!6.62e-15!63;CL:0000576!6.62e-15!63;CL:0000040!6.62e-15!63;CL:0000559!6.62e-15!63;CL:0000763!2.34e-14!112;CL:0000049!2.34e-14!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-63;33!CL:0002057;1.43e-63;33!CL:0000473;6.54e-43;39!CL:0000234;6.54e-43;39!CL:0000576;1.51e-30;48!CL:0000766;1.96e-20;69!CL:0000763;7.22e-10;100!CL:0002087;4.93e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;1.43e-63;33!CL:0002057;1.43e-63;33!CL:0000473;6.54e-43;39!CL:0000234;6.54e-43;39!CL:0000576;1.51e-30;48!CL:0000766;1.96e-20;69!CL:0000763;7.22e-10;100!CL:0002087;4.93e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.60e-52,42;CL:0002057,5.60e-52,42;CL:0000473,1.81e-44,48;CL:0000234,1.81e-44,48;CL:0000839,8.27e-43,66;CL:0000557,2.22e-39,67;CL:0000766,1.75e-38,72;CL:0002194,1.50e-36,59;CL:0000576,1.50e-36,59;CL:0000040,1.50e-36,59;CL:0000559,1.50e-36,59;CL:0002009,4.18e-35,61;CL:0000763,2.27e-24,108;CL:0000049,2.27e-24,108;CL:0002031,1.24e-19,120;CL:0000738,2.70e-16,136;CL:0002087,4.63e-15,115;CL:0002032,1.88e-13,161;CL:0000837,1.88e-13,161;CL:0000037,1.55e-12,168;CL:0000988,2.40e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.52e-39;42!CL:0000049;5.37e-08;108 | |ontology_enrichment_development_v019=CL:0002057;5.52e-39;42!CL:0000049;5.37e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.24e-15!80;UBERON:0001474!3.68e-13!86;UBERON:0007023!1.85e-11!115;UBERON:0002405!2.61e-11!115;UBERON:0002390!3.67e-11!102;UBERON:0003061!3.67e-11!102;UBERON:0004765!2.07e-10!101;UBERON:0001434!2.07e-10!101;UBERON:0002193!4.91e-09!112;UBERON:0000062!2.62e-08!511 | |ontology_enrichment_uberon=UBERON:0002371!1.24e-15!80;UBERON:0001474!3.68e-13!86;UBERON:0007023!1.85e-11!115;UBERON:0002405!2.61e-11!115;UBERON:0002390!3.67e-11!102;UBERON:0003061!3.67e-11!102;UBERON:0004765!2.07e-10!101;UBERON:0001434!2.07e-10!101;UBERON:0002193!4.91e-09!112;UBERON:0000062!2.62e-08!511 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.01e-33,76;UBERON:0001474,1.24e-30,82;UBERON:0002405,1.18e-29,93;UBERON:0002390,1.11e-27,98;UBERON:0003061,1.11e-27,98;UBERON:0004765,3.71e-27,90;UBERON:0002193,2.73e-24,108;UBERON:0001434,1.36e-23,100;UBERON:0003081,4.08e-12,203;UBERON:0002204,9.81e-12,167 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.0787107813136792,0,0.383829398097213,0.154816123316076,0.919421224478927,0,0.369754010166788,0,0,0.293600439334847,0.553995408531877,0,0,1.34349284543955,0,0.77272670290256,0.436194716338694,1.51150377475524,1.69808842831471,3.25400651667958,6.16751832032739,8.3620720141678,4.60307827715441,6.40401766322752,9.22280696565482,6.89491361473237,16.7826017731795,21.6682378550947,2.44715041405386,3.0019676506363,3.59557575112135,2.75475503133812,5.77672248736969,2.55734850319616,0.989553900560148,1.79517291859469,4.26224750532694,2.90209238628584,7.37600792098482,6.22822248995575,4.52247597462138,6.77927793946262,7.8187984093842,1.21079900526674,4.41933163185078,5.06339819905415,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0,0,0.198762407366705,1.72046919021225,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0.323745888736263,0,0,0.122834317311768,0.516628905878827,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.37223371266318,0.168776332241266,0.487185025805993,0.252433774244115,0,0.161646056818812,0,0,0.508681776931463,0,0.272746120590835,0.573609190778008,0,0.132529768321485,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0.828147600278907,0.505754070234305,0.241011029883482,0.992645754591546,0.653638332277218,0,0.539325232640658,1.76599318612811,0.38474715694639,0,0,0.4115740113314,0,3.80265104465493,0,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,1.58040879591855,0.858486162094873,0.984868024349589,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.704387472105808,13.0616712790686,6.05303804351238,18.4313952802515,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0.157702415033935,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0,0.606255142892519,0,0.604780586659361,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0.241718899183244,0,0,0,0,0.524497659837696,0,0.15403067420883,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.657779629937804,1.5686127061494,0,0,0,2.26690225624989,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0,0,0,0.170453254832202,0,0,0.192190067365106,0.510450849978337,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,1.56989728039846,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,2.35359501941948,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0.614481528616916,0,0,0.781552381608161,0,0,0,0,0,0.18714054040822,1.02555725490326,0,0.557216921387392,0,0.23874448473769,0,0,0.994147647766298,1.40669416410513,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0,0,0.738508832766417,0.311039587661807,0,0.179021174675609,0,0.394573622547734,0,0,0,0,0,0,0.0874599999961957,1.44999915086959,0,0,0.236387681767936,0,0,0,0,0.60298219312704,0,0.774054819518572,0,0,0.10893846351899,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0.902382642468723,0.980312671588698,0.335643173951685,0.37950746544837,0,0,0,0,0,0,0.265372693510018,0,0.593042257361244,0,0.104421949505455,0.134802265961354,0.802577647298789,1.1713222286267,0,0,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0.19351266257817,0.219267951258557,0.0821154570532092,0.193978032976839,0,0,0,0,0.126621591911757,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0.248505071130865,0.235694034616795,0.271808412147228,0,0.203996435272644,0,0,1.23214841002794,0,0,0,0.837847203816763,0.687481272035051,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0.157566364614447,0.247247575143499,0,0.0984274815147488,0,0,0.681017030557878,0.321506296930038,0.137539436597234,0.415440338029185,0,0.77380195455795,0.121499113316049,0,0.315222829196793,0.577000469484979,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,2.65013777824443,0.258565912723101,1.1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| ||
|short_description=p@chr6:31790025..31790063,+ | |short_description=p@chr6:31790025..31790063,+ | ||
}} | }} |
Latest revision as of 00:11, 31 July 2015
Short description: | p@chr6:31790025..31790063, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31790025..31790063, + |
Coexpression cluster: | C646_CD14_Mast_vagina_thymus_MCF7_immature_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.60e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.60e-52 | 42 |
defensive cell | 1.81e-44 | 48 |
phagocyte | 1.81e-44 | 48 |
myeloid lineage restricted progenitor cell | 8.27e-43 | 66 |
granulocyte monocyte progenitor cell | 2.22e-39 | 67 |
myeloid leukocyte | 1.75e-38 | 72 |
monopoietic cell | 1.50e-36 | 59 |
monocyte | 1.50e-36 | 59 |
monoblast | 1.50e-36 | 59 |
promonocyte | 1.50e-36 | 59 |
macrophage dendritic cell progenitor | 4.18e-35 | 61 |
myeloid cell | 2.27e-24 | 108 |
common myeloid progenitor | 2.27e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 1.24e-19 | 120 |
leukocyte | 2.70e-16 | 136 |
nongranular leukocyte | 4.63e-15 | 115 |
hematopoietic oligopotent progenitor cell | 1.88e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-13 | 161 |
hematopoietic stem cell | 1.55e-12 | 168 |
hematopoietic cell | 2.40e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.01e-33 | 76 |
bone element | 1.24e-30 | 82 |
immune system | 1.18e-29 | 93 |
hematopoietic system | 1.11e-27 | 98 |
blood island | 1.11e-27 | 98 |
skeletal element | 3.71e-27 | 90 |
hemolymphoid system | 2.73e-24 | 108 |
skeletal system | 1.36e-23 | 100 |
lateral plate mesoderm | 4.08e-12 | 203 |
musculoskeletal system | 9.81e-12 | 167 |