FFCP PHASE1:Hg19::chr1:20113572..20113583,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255104 | |EntrezGene=255104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=27393 | |HGNC=27393 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_AK309900_5end | |association_with_transcript=-5bp_to_AK309900_5end | ||
|cluster_id=chr1:20113572..20113583,- | |||
|coexpression_cluster_id=C43 | |coexpression_cluster_id=C43 | ||
|description=CAGE_peak_11_at_TMCO4_5end | |description=CAGE_peak_11_at_TMCO4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!2.49e-07!3;CL:0000039!4.04e-07!7;CL:0000586!4.04e-07!7 | |ontology_enrichment_celltype=CL:0002541!2.49e-07!3;CL:0000039!4.04e-07!7;CL:0000586!4.04e-07!7 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.69e-23;2!UBERON:0005754;2.63e-12;1!UBERON:0003124;5.32e-12;1!UBERON:0008425;1.19e-11;1!UBERON:0007123;1.58e-09;5 | |ontology_enrichment_development_v019=UBERON:0007297;8.69e-23;2!UBERON:0005754;2.63e-12;1!UBERON:0003124;5.32e-12;1!UBERON:0008425;1.19e-11;1!UBERON:0007123;1.58e-09;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1325;5.34e-07;7!DOID:3904;5.34e-07;7 | |ontology_enrichment_disease_v019=DOID:1325;5.34e-07;7!DOID:3904;5.34e-07;7 | ||
|ontology_enrichment_disease_v019_2=DOID:1325,5.67e-07,7;DOID:3904,5.67e-07,7 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006947;3.48e-33;3!UBERON:0004054;3.48e-33;3!UBERON:0005904;4.53e-25;4!UBERON:0000058;1.47e-17;10!UBERON:0000998;2.63e-12;1!UBERON:0006868;2.63e-12;1!UBERON:0001301;2.93e-12;1!UBERON:0001000;3.27e-12;1!UBERON:0005352;3.27e-12;1!UBERON:0002046;1.58e-09;5!UBERON:0003135;1.74e-09;11!UBERON:0004175;2.09e-08;21!UBERON:0003101;4.32e-08;22!UBERON:0000079;4.32e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0006947;3.48e-33;3!UBERON:0004054;3.48e-33;3!UBERON:0005904;4.53e-25;4!UBERON:0000058;1.47e-17;10!UBERON:0000998;2.63e-12;1!UBERON:0006868;2.63e-12;1!UBERON:0001301;2.93e-12;1!UBERON:0001000;3.27e-12;1!UBERON:0005352;3.27e-12;1!UBERON:0002046;1.58e-09;5!UBERON:0003135;1.74e-09;11!UBERON:0004175;2.09e-08;21!UBERON:0003101;4.32e-08;22!UBERON:0000079;4.32e-08;22 | ||
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| ||
|short_description=p11@TMCO4 | |short_description=p11@TMCO4 | ||
}} | }} |
Latest revision as of 16:58, 19 September 2015
Short description: | p11@TMCO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TMCO4_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | -5bp_to_AK309900_5end |
EntrezGene: | TMCO4 |
HGNC: | 27393 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.49e-33 | 3 |
internal male genitalia | 3.49e-33 | 3 |
duct of male reproductive system | 4.54e-25 | 4 |
seminal vesicle | 2.63e-12 | 1 |
seminal fluid secreting gland | 2.63e-12 | 1 |
epididymis | 2.93e-12 | 1 |
vas deferens | 3.27e-12 | 1 |
spermatic cord | 3.27e-12 | 1 |
internal genitalia | 1.40e-10 | 25 |
thyroid gland | 1.42e-09 | 5 |
pharyngeal pouch | 1.42e-09 | 5 |
thyroid diverticulum | 1.42e-09 | 5 |
pharyngeal pouch 2 | 1.42e-09 | 5 |
thyroid primordium | 1.42e-09 | 5 |
male reproductive organ | 1.74e-09 | 11 |
duct | 2.55e-09 | 19 |
male organism | 4.36e-08 | 22 |
male reproductive system | 4.36e-08 | 22 |
chorion | 6.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 5.67e-07 | 7 |
bronchogenic carcinoma | 5.67e-07 | 7 |