FFCP PHASE1:Hg19::chr15:72490099..72490109,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196996 | |EntrezGene=196996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27287 | |HGNC=27287 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IUY3 | |UniProt=Q8IUY3 | ||
|association_with_transcript=0bp_to_BC038451_5end | |association_with_transcript=0bp_to_BC038451_5end | ||
|cluster_id=chr15:72490099..72490109,- | |||
|description=CAGE_peak_3_at_GRAMD2_5end | |description=CAGE_peak_3_at_GRAMD2_5end | ||
|id=chr15:72490099..72490109,- | |id=chr15:72490099..72490109,- | ||
|ontology_enrichment_celltype=CL:0002327!1.84e-10!4;CL:0000349!5.51e-09!3;CL:0002577!5.51e-09!3;CL:0002328!1.58e-08!3;CL:0002536!8.16e-07!2 | |ontology_enrichment_celltype=CL:0002327!1.84e-10!4;CL:0000349!5.51e-09!3;CL:0002577!5.51e-09!3;CL:0002328!1.58e-08!3;CL:0002536!8.16e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002536;1.49e-40;2!CL:0000575;4.49e-40;2!CL:0002577;1.70e-27;3!CL:0000349;3.27e-26;19!CL:0000039;2.51e-12;7!CL:0000586;2.51e-12;7 | |ontology_enrichment_celltype_v019=CL:0002536;1.49e-40;2!CL:0000575;4.49e-40;2!CL:0002577;1.70e-27;3!CL:0000349;3.27e-26;19!CL:0000039;2.51e-12;7!CL:0000586;2.51e-12;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002536,8.98e-41,2;CL:0000575,9.99e-40,2;CL:0002577,1.39e-27,3;CL:0000349,2.58e-26,19;CL:0000039,2.51e-12,7;CL:0000586,2.51e-12,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.37e-18!14;UBERON:0000158!8.37e-18!14;UBERON:0001987!1.93e-11!4;UBERON:0004340!1.93e-11!4;UBERON:0001911!1.84e-10!4;UBERON:0005333!1.84e-10!4;UBERON:0008425!1.84e-10!4;UBERON:0005311!1.84e-10!4;UBERON:0005157!4.58e-10!51;UBERON:0005153!5.38e-10!37;UBERON:0000305!9.50e-10!7;UBERON:0003124!1.08e-09!7;UBERON:0000478!2.13e-09!24;UBERON:0004815!1.58e-08!3;UBERON:0002031!1.58e-08!3;UBERON:0004871!1.83e-08!8;UBERON:0004121!3.57e-08!169;UBERON:0000924!8.37e-08!173;UBERON:0006601!8.37e-08!173 | |ontology_enrichment_uberon=UBERON:0005631!8.37e-18!14;UBERON:0000158!8.37e-18!14;UBERON:0001987!1.93e-11!4;UBERON:0004340!1.93e-11!4;UBERON:0001911!1.84e-10!4;UBERON:0005333!1.84e-10!4;UBERON:0008425!1.84e-10!4;UBERON:0005311!1.84e-10!4;UBERON:0005157!4.58e-10!51;UBERON:0005153!5.38e-10!37;UBERON:0000305!9.50e-10!7;UBERON:0003124!1.08e-09!7;UBERON:0000478!2.13e-09!24;UBERON:0004815!1.58e-08!3;UBERON:0002031!1.58e-08!3;UBERON:0004871!1.83e-08!8;UBERON:0004121!3.57e-08!169;UBERON:0000924!8.37e-08!173;UBERON:0006601!8.37e-08!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;4.47e-26;7!UBERON:0001987;6.65e-21;4!UBERON:0000478;8.27e-21;24!UBERON:0000964;1.28e-20;4!UBERON:0010409;1.28e-20;4!UBERON:0005631;1.73e-18;10!UBERON:0000158;1.73e-18;10!UBERON:0010313;7.66e-09;10 | |ontology_enrichment_uberon_v019=UBERON:0000305;4.47e-26;7!UBERON:0001987;6.65e-21;4!UBERON:0000478;8.27e-21;24!UBERON:0000964;1.28e-20;4!UBERON:0010409;1.28e-20;4!UBERON:0005631;1.73e-18;10!UBERON:0000158;1.73e-18;10!UBERON:0010313;7.66e-09;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.36e-35,14;UBERON:0000158,1.36e-35,14;UBERON:0000305,3.45e-26,7;UBERON:0004871,5.13e-23,8;UBERON:0001987,5.72e-21,4;UBERON:0004340,5.72e-21,4;UBERON:0000478,6.87e-21,24;UBERON:0000964,1.90e-20,4;UBERON:0010409,1.90e-20,4;UBERON:0004348,1.90e-20,4;UBERON:0005427,1.90e-20,4;UBERON:0003124,2.00e-12,7;UBERON:0010313,8.96e-09,10;UBERON:0002342,8.96e-09,10;UBERON:0005062,8.96e-09,10;UBERON:0004923,1.12e-07,66 | |||
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| ||
|short_description=p3@GRAMD2 | |short_description=p3@GRAMD2 | ||
}} | }} |
Latest revision as of 22:12, 18 September 2015
Short description: | p3@GRAMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRAMD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC038451_5end |
EntrezGene: | GRAMD2 |
HGNC: | 27287 |
UniProt: | Q8IUY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 8.98e-41 | 2 |
corneal epithelial cell | 9.99e-40 | 2 |
placental epithelial cell | 1.39e-27 | 3 |
extraembryonic cell | 2.58e-26 | 19 |
germ line cell | 2.51e-12 | 7 |
germ cell | 2.51e-12 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.36e-35 | 14 |
membranous layer | 1.36e-35 | 14 |
amnion | 3.45e-26 | 7 |
somatic layer of lateral plate mesoderm | 5.13e-23 | 8 |
placenta | 5.72e-21 | 4 |
allantois | 5.72e-21 | 4 |
extraembryonic structure | 6.87e-21 | 24 |
cornea | 1.90e-20 | 4 |
eye surface | 1.90e-20 | 4 |
optic eminence | 1.90e-20 | 4 |
corneal primordium | 1.90e-20 | 4 |
chorion | 2.00e-12 | 7 |
neural crest-derived structure | 8.96e-09 | 10 |
neural crest | 8.96e-09 | 10 |
neural fold | 8.96e-09 | 10 |
organ component layer | 1.12e-07 | 66 |