FFCP PHASE1:Hg19::chr20:23731397..23731434,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:23731397..23731434,-
|short_description=p1@CST1
|description=CAGE_peak_1_at_CST1_5end
|association_with_transcript=124bp_to_J03870_5end
|EntrezGene=1469
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1469 | |EntrezGene=1469 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2473 | |HGNC=2473 | ||
|TSSclassifier=strong | |||
|UniProt=P01037 | |UniProt=P01037 | ||
|association_with_transcript=124bp_to_J03870_5end | |||
|cluster_id=chr20:23731397..23731434,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_1_at_CST1_5end | |||
|id=chr20:23731397..23731434,- | |||
|ontology_enrichment_celltype=CL:0002322!7.23e-12!5;CL:0002563!1.81e-08!4;CL:0002595!8.53e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.06e-20;5!CL:0002379;1.48e-12;1!CL:0000148;1.18e-10;10!CL:0000710;3.46e-09;20!CL:0000147;9.35e-08;14!CL:0002321;2.86e-07;15!CL:0000075;7.58e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.25e-20,5;CL:0002379,1.40e-12,1;CL:0000148,1.28e-10,10;CL:0000541,1.28e-10,10;CL:0000710,3.62e-09,20;CL:0000147,9.90e-08,14;CL:0000075,7.82e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006298;7.88e-13;1!UBERON:0006242;8.84e-13;1!UBERON:0008801;3.64e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;1.48e-12;1!DOID:3565;1.48e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.40e-12,1;DOID:3565,1.40e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000078!1.15e-13!18;UBERON:0000165!2.34e-10!28;UBERON:0000930!2.34e-10!28;UBERON:0001007!3.78e-10!155;UBERON:0001555!3.78e-10!155;UBERON:0007026!3.78e-10!155;UBERON:0004119!8.94e-09!169;UBERON:0000925!8.94e-09!169;UBERON:0006595!8.94e-09!169;UBERON:0001829!1.71e-08!2;UBERON:0003408!1.74e-08!10;UBERON:0001242!1.81e-08!4;UBERON:0001262!1.81e-08!4;UBERON:0004786!1.81e-08!4;UBERON:0004808!1.81e-08!4;UBERON:0001277!1.81e-08!4;UBERON:0000161!3.11e-08!35;UBERON:0003929!8.40e-08!54;UBERON:0001042!1.08e-07!10;UBERON:0009145!1.08e-07!10;UBERON:0000166!2.33e-07!21;UBERON:0000077!2.84e-07!130;UBERON:0006562!5.73e-07!11;UBERON:0000060!6.16e-07!12;UBERON:0003350!7.57e-07!5;UBERON:0003834!8.53e-07!5;UBERON:0001533!8.53e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.30e-23;2!UBERON:0001044;1.75e-17;6!UBERON:0003293;1.75e-17;6!UBERON:0003294;1.75e-17;6!UBERON:0010047;1.75e-17;6!UBERON:0003408;1.75e-17;6!UBERON:0000167;1.75e-17;6!UBERON:0001736;7.88e-13;1!UBERON:0001831;3.64e-12;1!UBERON:0001567;3.64e-12;1!UBERON:0000161;1.25e-09;19!UBERON:0000166;1.25e-09;19!UBERON:0001041;8.32e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.91e-23,2;UBERON:0001044,1.90e-17,6;UBERON:0003293,1.90e-17,6;UBERON:0003294,1.90e-17,6;UBERON:0010047,1.90e-17,6;UBERON:0000167,1.90e-17,6;UBERON:0001736,7.89e-13,1;UBERON:0006298,7.89e-13,1;UBERON:0001831,4.31e-12,1;UBERON:0001567,4.31e-12,1;UBERON:0008801,4.31e-12,1;UBERON:0000161,8.94e-11,36;UBERON:0003408,1.05e-10,10;UBERON:0000166,2.52e-08,22;UBERON:0002553,2.83e-08,61 | |||
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| ||
|short_description=p1@CST1 | |||
}} | }} |
Latest revision as of 21:05, 24 September 2015
Short description: | p1@CST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CST1_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 124bp_to_J03870_5end |
EntrezGene: | CST1 |
HGNC: | 2473 |
UniProt: | P01037 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.25e-20 | 5 |
meningothelial cell | 1.40e-12 | 1 |
melanocyte | 1.28e-10 | 10 |
melanoblast | 1.28e-10 | 10 |
neurecto-epithelial cell | 3.62e-09 | 20 |
pigment cell | 9.90e-08 | 14 |
columnar/cuboidal epithelial cell | 7.82e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.91e-23 | 2 |
saliva-secreting gland | 1.90e-17 | 6 |
gland of oral region | 1.90e-17 | 6 |
gland of foregut | 1.90e-17 | 6 |
oral gland | 1.90e-17 | 6 |
oral cavity | 1.90e-17 | 6 |
submandibular gland | 7.89e-13 | 1 |
submandibular gland primordium | 7.89e-13 | 1 |
parotid gland | 4.31e-12 | 1 |
cheek | 4.31e-12 | 1 |
parotid gland primordium | 4.31e-12 | 1 |
orifice | 8.94e-11 | 36 |
gland of gut | 1.05e-10 | 10 |
oral opening | 2.52e-08 | 22 |
anatomical cavity | 2.83e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.40e-12 | 1 |
meningioma | 1.40e-12 | 1 |